| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0796 |
|---|
| Symbol | |
|---|
| ID | 5052689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 791629 |
|---|
| End bp | 792345 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640470953 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001155578 |
|---|
| Protein GI | 145588981 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAA TAGAAATTAA AAATGCCTGG CAAGGTGAGA GTGATTGTGA AAATTGCTCC
ATTAGAAGTT CTGCGCTATT TGCGGAGTTG AATGAGGAAG ATTTTTCAAA AATACATTCC
CCAATCGATG ATCTTAGCTT TGAAGCTTAT GCGGGAATCT ATCAGCAAGG GGACAAGGCA
GGCTCGCTTT ATACCTTACG TAATGGCTAT ATTAAGATCT TGCATATTAA TTCTGATGGG
TCTGAGCGAA TCGTTAGAAT TGTTCTGCCC GGAAATCTGT TTGGTATGGA GGCGCTGCTT
GGTGAAGCCT ATGAGCACTC CGCTTATGCC TTGACGAATG TCCATCTGTG TAGAATCCCA
AAAAATATCA TTTCAACCTT AGGTGAAGAG TCGCCAAGAT TGCATCGTCA AATTGTAAAG
AAGTGGGGTG AAGCGCTGCT TCAGTCAGAA TCCTGGTTTT CTGAAATCAA TACCGGAAGA
ATTGAGGTGC GATTGGCGCG ATTCTTTTTG AAGCTTGCTA AAGAGTCCGG CTCGTTCGCA
ATTGCGCCTC TTTTTAAGCG GGAGGATATG GGTCTGATGA TGGATGTGAA GTGCGAAACA
ATTAGCAGAG CTTTAGCATC AATGGCTGAA CAAGGATTAA TCTCCAATAT CACTAGGCTA
TCGGTGCAAA TTCCAAACCT AGAACTCCTA CGACAGTTTT CTAAGCGCGG AGTTTAG
|
|---|
| Protein sequence | MKTIEIKNAW QGESDCENCS IRSSALFAEL NEEDFSKIHS PIDDLSFEAY AGIYQQGDKA
GSLYTLRNGY IKILHINSDG SERIVRIVLP GNLFGMEALL GEAYEHSAYA LTNVHLCRIP
KNIISTLGEE SPRLHRQIVK KWGEALLQSE SWFSEINTGR IEVRLARFFL KLAKESGSFA
IAPLFKREDM GLMMDVKCET ISRALASMAE QGLISNITRL SVQIPNLELL RQFSKRGV
|
|---|
| |