| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0769 |
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| Symbol | |
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| ID | 5052166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 769429 |
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| End bp | 770805 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470926 |
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| Product | Tfp pilus assembly protein FimV-like protein |
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| Protein accession | YP_001155551 |
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| Protein GI | 145588954 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3170] Tfp pilus assembly protein FimV |
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| TIGRFAM ID | [TIGR03504] FimV C-terminal domain
[TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCAAT TTAGCTTTAC GCGCTTTGTT AAAGTACTTT GCTGTGTATG GCTAAGCTGG
GCATGTTCGG TATGGGCTGT TTCTTTGGGT TCGCCTCTGT TGCAATCTCG TCCAGGCGAA
CCACTTCGTG TTGAAATCCC CATTCGTCTT GCTGTTGATG AGCAGGTGGA TCTAGCTTCC
CTAAAGGTAG CCTTAGCCAG TAAACCGACT TATGAGCGTC TGGGAATCTC ACAAAAAATT
CTAGACCTCA ATCCTCAGGC GATGGTCTAC CGTAATCGTC AAGAACAATT GATGGTATTG
GTCGAGACTG TTAATGCCGT GCCAATGACG GATGATCCTT TTTTGGATTT GCTGATTACT
CTCAATTGGG CGAGCGGTAG CATTACTAAA ACCTATACCT TGTTAATTGG CGACACTCAA
AAGGTTACTG TAAAACCTGG TCAAACCTTA TCTGAGATAG CTGCATTAAT GACGCCGCAG
TTAGATGGTG CCAGCCTAGA TCAAACGATT ATGGCGCTCT ACAAAGCCAA TCCAGATGCC
TTTGCCAGCG GCAGCATCAA TCGTTTAGCA GCTGGTGCTG AGTTAAATAA ACCCAGCCAA
GCTCTCTTGC GCTCTATTAG CCCAGCCGAA GCCAGTCAGT TTGTTGCTGA TGCGAATGAA
CAATGGCGTG CAGACCATGA TGCAATAGAT GGATCAAATA GATCGCAGAA GTCTGCCGAC
AAAGATGAGA ATGCAAGCCC CAAGGATCGT TTAAAGATTG GCTCCAGCAC CGATGGTAAT
GCCCAGGAGC GTCGTTATAC AGAAGATCTT GTAGCTCAAG AGAAGGAGCT TGAGCAAGCG
AAGGCGCGCG TTGCTGAGCT AGAGAAAAAT ATTACTGATC TGCAGCGTTT GCTCGATAAG
TCAAAAGAGA AAAAAGCACT TGATAGTAAT TTTGGTTTAG GTGGCTTTGG CCCCGCTATT
TTGGCGATTG GTTTAATTGC GTTGACTGGC CTTTTATTGT GGGCTTTGGC GCGTAATGCG
CGTCGTACTG AAGCACCTAG TTTTGAGGCT AAGGTAGAAC ATGCTCCTCA GAAAGCCGCG
CACAATGCGC CATTTGAAAT ACCGGATCGC ACTAAGGCCT TGTTTGCAGG CATCGATCTC
GATTTATCTA AGCCCGTAAA AGAATCCTCA GTCAATGCTC AAGTTCCCGC TTCAAATCCA
TTGGCAGATA CCTTACGCGT CAAATTAAAC CTTGCACGTG CCTACATCAC GATTGAAGAT
TTTTCTGCTG CTAAAAAATC TTTAGAGGAG ATATTGCGAG TTAGCAATAC GGTTGATCCT
GCTATAACGA TTGAAGCGCA AGGATTATTG GCGGAGCTGT CGCATCGCCA GGCCTAA
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| Protein sequence | MTQFSFTRFV KVLCCVWLSW ACSVWAVSLG SPLLQSRPGE PLRVEIPIRL AVDEQVDLAS
LKVALASKPT YERLGISQKI LDLNPQAMVY RNRQEQLMVL VETVNAVPMT DDPFLDLLIT
LNWASGSITK TYTLLIGDTQ KVTVKPGQTL SEIAALMTPQ LDGASLDQTI MALYKANPDA
FASGSINRLA AGAELNKPSQ ALLRSISPAE ASQFVADANE QWRADHDAID GSNRSQKSAD
KDENASPKDR LKIGSSTDGN AQERRYTEDL VAQEKELEQA KARVAELEKN ITDLQRLLDK
SKEKKALDSN FGLGGFGPAI LAIGLIALTG LLLWALARNA RRTEAPSFEA KVEHAPQKAA
HNAPFEIPDR TKALFAGIDL DLSKPVKESS VNAQVPASNP LADTLRVKLN LARAYITIED
FSAAKKSLEE ILRVSNTVDP AITIEAQGLL AELSHRQA
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