Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0750 |
Symbol | |
ID | 5052808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 752455 |
End bp | 753309 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470907 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_001155532 |
Protein GI | 145588935 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0369495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATTC AATCAGTAGG TGTAATCGGC GCAGGTACCA TGGGAAATGG TATCGCTCAA GTATGCGCAG TAGCTGGTTT AGATGTTGTG ATGGTAGATA TTAATGATGC CGCTGTTCAA CGCGGACTGG ATCAAATCAG TAAGAGCTTG GATCGTCTTG TAAAAAAAGA AACCTTAACG CCTGAAGCAA AGGATGCAGC TCTGAAGCGC GTCAAAGGAA GCGCTTCTTA TGCCGACTTC AAGGGTCTGG AGCTAGTGAT TGAGGCTGCG ACTGAGAATC AGGCTATCAA AGAAAAGATT TTGAAACAAG TCGATGAGAT CGTCGGTAAA GAAACTATTA TTGCCACCAA TACTTCATCG CTTTCTATTA CCAAGTTAGC TGCGTTGGAT TCCAATCCTG CACGCTTCAT TGGCATGCAC TTCTTCAATC CCCCGCCCTT GATGGCACTA GTTGAGGTAA TTCGTGGATT GCAAACAAGT GACGAAACAC ATGCAGCTAT TATTGAGATG GCTAAGCGTA TTGGCAAAGA ACCCATCACC GTAAAGAACT CACCCGGGTT TGTTGTTAAC CGCATCTTGC TTCCAATGAT TAATGAAGCC TTCTTCGTGC TTTCTGAAGG TTTAGCTAGC CCTGAAGATA TCGATGCCGG CATGAAATTG GGCTGCAACC AACCTATTGG ACCGCTTGCA CTCGCAGACC TAATCGGTCT TGATACCTGC CTTGCAGTAA TGGAAGTGTA TTTTGAAAAC TTCAGCGACT CTAAATATCG TCCGTGCCCT CTTCTTCGTG AAATGGTTGC AGCAGGTTAC CTCGGTCGTA AAACTGGTCG TGGCGTTTAC ACCTACGACA AATAA
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Protein sequence | MKIQSVGVIG AGTMGNGIAQ VCAVAGLDVV MVDINDAAVQ RGLDQISKSL DRLVKKETLT PEAKDAALKR VKGSASYADF KGLELVIEAA TENQAIKEKI LKQVDEIVGK ETIIATNTSS LSITKLAALD SNPARFIGMH FFNPPPLMAL VEVIRGLQTS DETHAAIIEM AKRIGKEPIT VKNSPGFVVN RILLPMINEA FFVLSEGLAS PEDIDAGMKL GCNQPIGPLA LADLIGLDTC LAVMEVYFEN FSDSKYRPCP LLREMVAAGY LGRKTGRGVY TYDK
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