Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0691 |
Symbol | |
ID | 5053458 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 690865 |
End bp | 691548 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470846 |
Product | outer membrane lipoprotein carrier protein LolA |
Protein accession | YP_001155473 |
Protein GI | 145588876 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2834] Outer membrane lipoprotein-sorting protein |
TIGRFAM ID | [TIGR00547] periplasmic chaperone LolA |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.947793 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAACGAC TTTTCTCCGC GCTTGCCATT GGCATCGCTA GCATCCTGAT TTCAAATGTA GCTATAGCCG AAGGTGAATC TGGCTCTGAG CAATTGCGTC AATTTGTACG CAACTCAAAA ACAGCTGAAG GTGATTTTGT TCAACAACAA TTACGTGCGC CTAAAGCAAA TGAGCCACAA GACAAGGGTT TAAAAGTAGT GCGTCAAACC CAGGGGCAAT TTGTCTTTCA AAGGCCTGGC CGCTTTGTTT GGGATACACA AAAGCCATAC GAACAAAAGT TGATTACCAA TGGCACTCAA CTCATTTTGT GGGACAAGGA TTTAAATCAA GCCACGTTTC GTCCTGCAGG ACAAGCTTTG GCTTCAACAC CTGCCGCTAT ATTGTTTGGC GAATCTTCCT TGGATCAACA TTTTGAGTTA ATCGATGGTG AAGAGCGACT GGGGATGAAA TGGGTTGCAT TGGTTCCCAA AAAAGATCCG AACGCTAAGA ACCAAAATGA TTTGCCTTAT ACCAAGATCT CGATTGGCAT GACTAACGGT CTACCGAAGG CTCTAGAGCT GATTGATGGA CTGGGAAGCG TAGTCTTGGT AACCTTAGAC AACATAAAGC TAAATGTGAA TTTGCCGGCA AATCGCTTCA ATTTCATCCC CCCTAAAGGC GCAGAAGTTG TCCGCTTAAA CTAG
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Protein sequence | MQRLFSALAI GIASILISNV AIAEGESGSE QLRQFVRNSK TAEGDFVQQQ LRAPKANEPQ DKGLKVVRQT QGQFVFQRPG RFVWDTQKPY EQKLITNGTQ LILWDKDLNQ ATFRPAGQAL ASTPAAILFG ESSLDQHFEL IDGEERLGMK WVALVPKKDP NAKNQNDLPY TKISIGMTNG LPKALELIDG LGSVVLVTLD NIKLNVNLPA NRFNFIPPKG AEVVRLN
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