| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0674 |
|---|
| Symbol | |
|---|
| ID | 5052964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | + |
|---|
| Start bp | 671673 |
|---|
| End bp | 672926 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 640470829 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001155456 |
|---|
| Protein GI | 145588859 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2223] Nitrate/nitrite transporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.201376 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGTAAGC CATGGCATAA CCGTTGGGCG CAGTTAGTAT TCGGAATTAT TTGCATGGGA
TTGGTTGCCA ATCTTCAATA TGCATGGACT TTGTTTGTTA ACCCCATTCA GATTAAAACT
GGCTGGGCTT TATCTGCAAT CCAACTCTCT TTCTCAATCT TTATCGTAGT AGAAACTTGG
CTGGTTCCAG TTGAAGGTTG GATGGTTGAT AAATTTGGAC CTCGCATTGT TATTCTGATC
GGCTCTGTAT TTGCTGCAGC TGGTTGGGTG ATGGATAGTT ATGCAACTTC ACTCGAAATG
CTTTATGCAG CAGCTGTTGT TGCTGGTATT GGTGCTGGTT GCGTTTACGG CACTTGCGTT
GGTAATGCGC TGAAATGGTT TCCGGATAAG CGTGGTCTCG CTGCTGGTTT AACTGCAGCA
GGCTTTGGAG CTGGTGCAGC GATTACGGTA ATTCCAATTG GCAATATGAT TCTGGCAGAT
GGCTATGAGC ATGCCTTTCT ATTCTTTGGT CTTGCACAAG GCGCACTGAT TTTCTTGTTG
GCTTTATTGA TGACAAAACC AACGCCTCCT AAGGGCGTGC AGGCAGCTCC TCGTATCGTT
ACCACTAAGG TGGACTATAC CTCTGGTCAA ATGATTAAAA AACCTTTATT TTGGCTAATC
TATGTCATTT TTGTTGTTGT AGCCGCTGGG GGTTTGATGG TGACGGCGCA AATTGGACCG
ATTGCTAAGG ATTGGGGTCT TGCGAAATTG CCGATGATCT TATTTGGCAC TACCTTGCCG
CTGCTCACAA TGACTTTATC AATTGATAAC CTATGCAATG GTTTCACTCG CCCACTATGT
GGATTTATTT CAGATCGCTT TGGTCGTGAA AACACTATGT TCTTCGTCTT CTTTGGCGAG
GGCTTATCGA TGCTAGGGTT GATGCATTTT GGACATGATC CATATGCATT TATGACTTTT
GCTGCATTGA TCTTCTTGTT TTGGGGTGAA ATTTTCTCGA TCTTCCCAGC GATCTGTGCG
GATACATTTG GTGTAAAAAA TGCAGCTGGT AATGCCGGTA CTTTATACAC AGCAAAAGGA
ACCGCTTCTC TATTGGTGCC TTTGGCATCT GTTCTTTCAT CAACTGGTGA TTGGAATACG
GTTTTTGTAG CGGGTGCAAT TGTTACAATT ACCGCGGCGT TTGCAGCTAA GTTCATTTTG
GCGCCAGCTC GCAAGCGCTT TATTGAAGAA GCCAACAAGA ATGCCGGTCA TTAA
|
|---|
| Protein sequence | MSKPWHNRWA QLVFGIICMG LVANLQYAWT LFVNPIQIKT GWALSAIQLS FSIFIVVETW
LVPVEGWMVD KFGPRIVILI GSVFAAAGWV MDSYATSLEM LYAAAVVAGI GAGCVYGTCV
GNALKWFPDK RGLAAGLTAA GFGAGAAITV IPIGNMILAD GYEHAFLFFG LAQGALIFLL
ALLMTKPTPP KGVQAAPRIV TTKVDYTSGQ MIKKPLFWLI YVIFVVVAAG GLMVTAQIGP
IAKDWGLAKL PMILFGTTLP LLTMTLSIDN LCNGFTRPLC GFISDRFGRE NTMFFVFFGE
GLSMLGLMHF GHDPYAFMTF AALIFLFWGE IFSIFPAICA DTFGVKNAAG NAGTLYTAKG
TASLLVPLAS VLSSTGDWNT VFVAGAIVTI TAAFAAKFIL APARKRFIEE ANKNAGH
|
|---|
| |