| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0672 |
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| Symbol | |
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| ID | 5053104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 668030 |
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| End bp | 670363 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640470826 |
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| Product | ABC transporter related |
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| Protein accession | YP_001155454 |
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| Protein GI | 145588857 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.264122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCAG AAATCCTACC TTTTGCCCCT GCGATGCCAA GTCATTGGCT GATGATTCTT
GAGGCCCCAC CATCCCCCAT GCGGAGCCAA GAGGCAGTAC TGGCATGGGT TGAACTCGAT
TTAGATGCAG AGTTGCGCTT TGAAAAAAGC CTACTTTGGC TAACAGAGCA GGGTCTATTT
TGGACTGACG GCACTCGTTT TGAGTCATGG CCATTAGGGT CTGGCGAGCA TTTGGTTCAC
GGGGACCATG CCGGAGTAGG TCGATTGAGT CTCGAAACTG AGCAAAATCT ACAAAGAATT
TGGTATTTCA CTTTGGCGGT AAACCCCCAA GTCTTGCGTT TGCAATCAAG CTTTAGACAG
CTGACACGCG GTGATCAAGA GGCACATGGC GAGGCAAGTG AGTATGACAA GCAAGTGTGC
CCTGTTTGCT TAAGTCCTAA GCCAGCCAAT TCGGATATCT GCCCAACTTG TGATCCAGAA
GATGACAAGC CAGCATCCAC CTGGACCTTG TTTAAGCTTT GGCGTTTTGC TAAGCCTTAT
CAACACCAGC TCTTACTTGG TTTTATTTTG ACCTTGCTGT CCACAGGCGC GACATTAATT
CCGCCTTATT TAACAATGCC TTTAATGGAT CATGTTTTGA TTCCTTATGA GCGTGGCAAC
CCGATAGATT TTCATTTAGC CACTAAATAT CTGTTAGCTT TATTTGGCGC CTCTATCGTC
GCCTGGGGAT TAGGTTGGTG GAAAACGTAT TTGCTTGCAT TAGTGAGCGA ACGGATCGGC
GCTGATTTAC GTAATACGAC TTTTGAACAC TTACTCAAAC TCTCACTCGA GTATTTTGGT
GGTAAGCGAA CTGGTGACTT AATTGCCCGT ATTGGTGCCG AGACCGATCG CATCTGTGTC
TTTCTATCCC TTTACGCATT GGACTTCATA ACCGATGTGC TGATGATCAC GATGACGGCT
GCGATCTTAG TATCGATTGA TCCATTGCTT GCATTAGTGA CCTTAGCACC GTTGCCTTTC
ATTGTGTGGA TGATTCATGC AGTGCGTGAT CGATTGCGTT TTGGATTTGA GAAGATTGAT
CGCATCTGGT CTGAAGTAAC GAATATTTTG GCCGATACCA TTCCTGGCAT TCGTGTTGTT
AAGGCCTTTG CTCAAGAAGA CCGTGAGCTC AAACGTTTTG TAGATTCCAA TAAGCACAAT
CTACTCATTA ATGATCGCGT GAATCGAGTT TGGGGATTAT TTTCTCCAAC AGTCACGCTC
TTAACCGAGA CAGGCTTATT GGTTGTTTGG GGATTTGGTA TTTGGCAAGT AGCCCATCGA
AGAATCTCCG TTGGTGTTTT GATAGCCTTC CTGGCTTACA TCGGCCGCTT TTATGTGCGC
CTAGATTCGA TGAGTCGTAT TGTTTCGCAC ACTCAAAAAG CCGCTGCTGG TGCTAAGCGT
ATTTTCGATA TCTTGGATCA CGTATCGAGC GTTCCTGAGC CAATGAATCC TGCACCTCTA
GGACCAGTAA AAGGTGGTAT CTCCTTGCGT GGCGTCGGTT TCCGCTATGG CAATCGTGCA
GTTTCCAAGG GGATTGATTT GGATATTGCC CCAGGTGAAA TGATCGGGTT AGTAGGGCAT
AGCGGTTCAG GTAAGAGCAC CTTGGTGAAT TTAATCTGCC GTTTTTATGA TGTGAGCTCA
GGATCCATTG CTTTAGATGG GCGCGATATT CGTAGCATTG GTATTGCTGA TTACCGCAAA
TGTATTGGTC TGGTATTGCA AGAGCCCTTC TTATTCTTTG GCACCATTGC AGAAAATATT
GCCTACGGCA AACCGGATGC GACACGAGAA GAAATTATTG AAGCAGCGCG CGCAGCACAT
GCGCATGATT TTATTTTGCG ACTTCCTTTG GGTTATGACT CTTTGGTTGG TGAGCGTGGC
CAATCCTTAT CTGGCGGTGA GCGTCAACGT ATCTCTATTG CACGCGCGCT CTTAATTAAT
CCAGCCATTC TCATTCTGGA TGAGGCAACC TCATCGGTTG ACACCACTAC TGAGAAAGAA
ATTCAGCGTG CTTTGGATAA CTTGGTTAAA GGCCGCACAA CCATTGCGAT TGCGCACCGT
CTCTCCACAC TCAGAAAGGC TGACCGCCTC GTGGTGTTGG ACAAAGGGGA GATTGTCGAA
ATTGGCTCTC ATGACCAGTT AATGGAGGCC CAAGGTGCTT ATTACGTCTT GTACCAAGCC
CAGTTGCGTC ATGCAGCTGA ATTAGTTGAG GGTGGTGCGA TTGGCGAGAG TTTGGAGGAG
CGCCAAGAAG AGCGTTTAGA AGAAGCGGCC AAGGATATTG GAGGAGGCGT ATGA
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| Protein sequence | MKPEILPFAP AMPSHWLMIL EAPPSPMRSQ EAVLAWVELD LDAELRFEKS LLWLTEQGLF
WTDGTRFESW PLGSGEHLVH GDHAGVGRLS LETEQNLQRI WYFTLAVNPQ VLRLQSSFRQ
LTRGDQEAHG EASEYDKQVC PVCLSPKPAN SDICPTCDPE DDKPASTWTL FKLWRFAKPY
QHQLLLGFIL TLLSTGATLI PPYLTMPLMD HVLIPYERGN PIDFHLATKY LLALFGASIV
AWGLGWWKTY LLALVSERIG ADLRNTTFEH LLKLSLEYFG GKRTGDLIAR IGAETDRICV
FLSLYALDFI TDVLMITMTA AILVSIDPLL ALVTLAPLPF IVWMIHAVRD RLRFGFEKID
RIWSEVTNIL ADTIPGIRVV KAFAQEDREL KRFVDSNKHN LLINDRVNRV WGLFSPTVTL
LTETGLLVVW GFGIWQVAHR RISVGVLIAF LAYIGRFYVR LDSMSRIVSH TQKAAAGAKR
IFDILDHVSS VPEPMNPAPL GPVKGGISLR GVGFRYGNRA VSKGIDLDIA PGEMIGLVGH
SGSGKSTLVN LICRFYDVSS GSIALDGRDI RSIGIADYRK CIGLVLQEPF LFFGTIAENI
AYGKPDATRE EIIEAARAAH AHDFILRLPL GYDSLVGERG QSLSGGERQR ISIARALLIN
PAILILDEAT SSVDTTTEKE IQRALDNLVK GRTTIAIAHR LSTLRKADRL VVLDKGEIVE
IGSHDQLMEA QGAYYVLYQA QLRHAAELVE GGAIGESLEE RQEERLEEAA KDIGGGV
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