Gene Pnuc_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0663 
Symbol 
ID5052105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp654373 
End bp655008 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content50% 
IMG OID640470817 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001155445 
Protein GI145588848 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACTCCA TTGCTCAACT TCGCAAAAAC TACACCTTTG GTCAGCTTTC AGAAACCGAG 
GTTCCTCATC ATCCGTTGCC CTTGTTTCAA CTGTGGTTTG ATCAAGCAGT GAAAGCAGAG 
TGTCCTGAAC CCAATTCCAT GACTTTGGCA ACAGCTGATA AAGCAGGCAA TCCATCAGCC 
CGTATTGTCT TACTAAAAGG CGCAGACCAA AACGGTTTCA CCTTTTTTAC CAATTACGAG 
AGTCAAAAAG GCCAAGATCT CGCTGTTCGC CCTCAGGCTG CCCTTCTTTT TCACTGGCAT 
GAACTAGAGC GTCAAGTTCG AATCAAGGGC CTTGTGGAGC GCGTAAGCGC TACTGAAAGC 
GACGAATACT TTCACTCACG CCCACCTGCT TCCAGAATTG GTGCTTGGGC CTCGCCGCAA 
AGTGCTGCTA TCCCGAATCG CGAGTTTTTA GAAGAGGCTG AGAAACGTTT CAAGTCTGAA 
TTTGGAGAAG CGCCTCCACG CCCTGAGCAT TGGGGTGGTT ATCGACTACG CCCAACTGAG 
ATGGAGTTTT GGCAAGGTCG CCCCTCCCGT CTGCATGATC GCATCCATTA CAAGCTCGAT 
GGCAGCAATT GGAAAGTGAC TCGCCTCGCA CCGTAA
 
Protein sequence
MDSIAQLRKN YTFGQLSETE VPHHPLPLFQ LWFDQAVKAE CPEPNSMTLA TADKAGNPSA 
RIVLLKGADQ NGFTFFTNYE SQKGQDLAVR PQAALLFHWH ELERQVRIKG LVERVSATES 
DEYFHSRPPA SRIGAWASPQ SAAIPNREFL EEAEKRFKSE FGEAPPRPEH WGGYRLRPTE 
MEFWQGRPSR LHDRIHYKLD GSNWKVTRLA P