Gene Pnuc_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0601 
Symbol 
ID5052660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp587921 
End bp588604 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content47% 
IMG OID640470754 
ProductGntR family transcriptional regulator 
Protein accessionYP_001155383 
Protein GI145588786 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCATAG AGCAGCCCAA CTCTCAAAAT TTGCCAGAAG CGATCTTTCA AAAATTGAGG 
TCACTATTGG TGGAGGGCAA GATTGCGCCG GGAAGCAAGC TCAATGAGCG CGAATTGGCT 
GAAAGCCTCC ATGTTTCTCG TACCCCCATT CGAGAGGCGA TTCGTCGTCT TGCTGCAGAG 
GGTCTCGTTG AACTCATTAC CAATCGCGGA GCCATTGCAT TGCAACTGAG CTTGGAAGAT 
GTCATCCATA CCTTTGATGT GATTGCACAG CTCGAAGGCT TCTCAGGCGA GTTGGCTGCA 
AACAATATCA GTGATGCAGC TCTATCAGAA TTAGAAGCCC TTCAATATGA AATGATGGCC 
TCTTATGCGC GTAGAGATTT ATCGAGCTAT TACAAACTCA ACTTACGCAT ACATCACCTG 
ATTAATCAGG CAGCGAACAA TCCCATCCTC TCCCGCCTCT TCTCCCAAGT CAATGCGCGC 
ATTGAAGCGC TTCGCTTTCG CTCTAACCAA GACGGCGTGA AATGGGAAAA AGCGGTGGAA 
GAACATCAAG AAATGCTTGA TGCACTTAAA ACACACGACA GCGCCAGAAT GCGCAAGATC 
ATGATTCAGC ACGTACAAAA CAAACGCGAT GTAGTGGTGC AATTACTGAC ATCAGAAACC 
TTATCAGAGA CAACTTCATC ATGA
 
Protein sequence
MSIEQPNSQN LPEAIFQKLR SLLVEGKIAP GSKLNERELA ESLHVSRTPI REAIRRLAAE 
GLVELITNRG AIALQLSLED VIHTFDVIAQ LEGFSGELAA NNISDAALSE LEALQYEMMA 
SYARRDLSSY YKLNLRIHHL INQAANNPIL SRLFSQVNAR IEALRFRSNQ DGVKWEKAVE 
EHQEMLDALK THDSARMRKI MIQHVQNKRD VVVQLLTSET LSETTSS