Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0600 |
Symbol | |
ID | 5053993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 584847 |
End bp | 587924 |
Gene Length | 3078 bp |
Protein Length | 1025 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640470753 |
Product | FAD linked oxidase domain-containing protein |
Protein accession | YP_001155382 |
Protein GI | 145588785 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAC CCTTAGACCT CAAAGAGCTG ATGGTGGATC AAGCTGTATT AGCAAAACGC TTGCGCCGAG AAACTACTGG CGAAGTCATG ACTGATAGCG CCAGTCGCGG CCGCTATGCA ACCGATGCTT CTATTTATCA AGCAATGCCT GTTGCAGTCT TTGTGCCAAA AACTGCACAA GATATTGCTA ATGCCATTCA AATTACAAGT GATCTCAACG TACCCATTCT TCCTCGTGGA GGCGGCACAA GCCAATGCGG TCAAACTACT GGCGCAGCAT TAGTTATTGA TAACACCAAA TACTTTAGAA ATGTCTTAGA CCTCAATATC AATAAGGGGT ATGTTGAAGT AGAACCCGGC ATTGTGCTGG ATCATCTCAA TGGCTCACTC AAACAACATG GCCTTTGGTA TCCAGTGGAT GTCTCTACTG CTGGACAGGC AACGATTGGT GGCATGGCAG GAAATAATTC TTGCGGCAGT CGCTCAATTG CATACGGCAA TATGGTGCAT AACGTATTAG GCATCGATGC TTGGTTGGCA GATTGCAGAA TTGCTAACTT TGGTGATTAT GCAAATAGCT CAGGTGCCGC TAAACAATTG GGTGACTTTG TTAAGGGATT AGCCACCTCA CTTCAACCAG AGATTGAAGA GCGCTTCCCT AAAGTACTCA GGCGTGTAGC TGGCTATAAC CTAGATATCT TCCATCCACA GAGTCAACTT CCCTATACCC AAGACGGCAG CGTGAACTTA TCGCACCTAC TGGTAGGCAG CGAAGGCACT CTGGCTTACT TTAAGTCCCT CAAACTCAAA CTAGCACCGT TACCGCAACA CAAGGTGTTG GGTATTGTGA ACTTTGCTAG CTTCTACAAG GCGATGGATA GCGCGCAGCA CATTGTGAAG CTTGGCCCTA CTGCAGTGGA GTTGGTGGAT CGCACCATGA TCGATTTAGC CCGCAGTAAT CCCAGCTTCA AAAAGACGAT TGAGAGCGCC TTAATTAATT CTGCAGCTCA AACGCCTGAG GCAATTTTGC TGGTTGAGTT TTCAGGCGAA GCCCATGCGC CATTGTTAGA AAAGCTCAAA GCACTACAAG AACTCATGAG CGATTTAGGC TTGCCTGGCT CAGTGGTTCC AATGCCAAAC GCCGGATTAC AAAAGAATTT GTGGGAAGTA CGTAAAGCGG GCCTCAACAT CATGATGAGC CTCAAAGGCG ATGGTAAGCC AGTGAGCTTT ATTGAAGATT GCGCCGTTCC TTTAGAAAGC CTGGCCGATT ACACCCAAGC ACTAACCGAA GTATTTTCTA AATATGGTTC ACGTGGCACT TGGTATGCGC ATGCGTCGGT AGGTACATTA CATGTACGTC CTATTTTGGA TATGCGTCGT GATGGCGCCC AAAAAATGCG GGCTGTCGCT GAAGAAGCGT CAGCCTTAGT ACGTAAATAC AAAGGGGCTT ACAGTGGCGA ACATGGCGAT GGTCTGTGTC GTGGTGAATG GATCTCTTGG CAATTTGGAC CGAAGATAAC CGAAGCTTTA GCAGAAATTA AAGACGCCTT TGATCCAACA GGATTATTTA ATCCGGGGAA GATTATTAAT CCTCCCAAGA TGGATGATGC GAGCAACTTT AGATTTCCAC CAAGCTATAA AGTCATTCCA CTCCAACCCG CCTTGGACTG GTCCGCATGG AATGTGCAAA ATGATCCCGT AACTGAAGCC ATTACAGCTG CTGGCACTGG TGGCGACCCC GCCATGGGCT TAGCCAAAGC GGTAGAGATG TGCAATAACA ATGGCCACTG TCGTAAATTT GATGCCGAAG TGATGTGCCC TAGCTATCGC GTCACAAGAG ATGAAAAGCA CCTCACCCGC GGTAGAGCCA ATACCATACG TCTTGCTCTT TCTAACCAGT TAGATATTCA AGATGAGTCA TCCCCTCTTG GTAGCGATGC TATTAAAGAG GTGATGGAAT TGTGTGTGAG CTGTAAAGCC TGTCGCCGTG AATGCCCTAC TGGTGTCGAT ATGGCCAAGA TGAAAATTGA GTTTTTATCT GCATACAAAA AACGGGTGGG CCACTCATTA AGAGATTTGG CTGTTGCCCA CCTGCCGCAG TACGCCTCCA TCATTAGCAA CACCCCATAC TTGCCGACCT TACTTAACTT ACGCAACCAT GTTCCAGTCA TCGCCAAGCT TCAAGAATGG ATCATGGGAA TTTCTGCACA AAGAAGTTTG CCTGTGTGGG AAAGCAAGAC ATTTTGGAAT CAGGCCTCTA AAGAATCCAA AATGGCTTCC TACCAATGTA GCCCCGAGGA ATTATCAAAG CAAAAAGGCG TTGTGCTTTT TGCAGATACC TTTAATGCTT ACTTTGAGGA TGAGAACCTG CAGGCCGCAC TGAAGGTGCT TGAAGCTGGG GGATACAAGG TACACATCCC TCAAAAGAAC AAGGCAAAGC AAGCCACTGA GGCCAAACAA GCCAGCACCT GCTCTAAAGA ATTCTGCTGC GGAAGAACTT ATCTCGCGGC GGGTATGGTC GATAAAGCCA AATCCACGCT GGGTGAGCTA GTGGATCATC TCGCGCCCTA CGCCGAAAAA AATATTCCCA TTATTGGATT AGAGCCTTCC TGCTTATTTA CACTCAAGGA TGAGGCTTTG GTTATGGGCT TTGGAGAGCG CGCTGTGACC GTCTCTCAAC GAGCACAACT CTTAGAAGAA TTCTTGGCTG CTGAAGTGAA AGCCGGAAAA TTAACACTGC CACTTAAGCC ATCGAGCAAA CCAGTGCTGT TTCATGGTCA CTGCCATCAA AAATCATTTG CTGCAGTTAC CCCTGCCATG GAGTTATTGA AACTGATTCC AAATGCAGAC CCTAAGCTGA TTGAATCCTC TTGCTGCGGC ATGGCTGGCA GCTTTGGGTA TGAGGCCGAA CATATTGAAG TATCCAAACA GATGGCTGAA GCGAGTTTAT TGCCTGCTAT TCGTAAATCG CCTGATAGCT GGGTAGTTGC CGATGGGACG AGTTGCCGCC ATCAAATTGC TGATGGGACA CAAAGAGAGG CTGTACATAT TGCCAAAATC TTGGCAGCAC ATCTTTAA
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Protein sequence | MNKPLDLKEL MVDQAVLAKR LRRETTGEVM TDSASRGRYA TDASIYQAMP VAVFVPKTAQ DIANAIQITS DLNVPILPRG GGTSQCGQTT GAALVIDNTK YFRNVLDLNI NKGYVEVEPG IVLDHLNGSL KQHGLWYPVD VSTAGQATIG GMAGNNSCGS RSIAYGNMVH NVLGIDAWLA DCRIANFGDY ANSSGAAKQL GDFVKGLATS LQPEIEERFP KVLRRVAGYN LDIFHPQSQL PYTQDGSVNL SHLLVGSEGT LAYFKSLKLK LAPLPQHKVL GIVNFASFYK AMDSAQHIVK LGPTAVELVD RTMIDLARSN PSFKKTIESA LINSAAQTPE AILLVEFSGE AHAPLLEKLK ALQELMSDLG LPGSVVPMPN AGLQKNLWEV RKAGLNIMMS LKGDGKPVSF IEDCAVPLES LADYTQALTE VFSKYGSRGT WYAHASVGTL HVRPILDMRR DGAQKMRAVA EEASALVRKY KGAYSGEHGD GLCRGEWISW QFGPKITEAL AEIKDAFDPT GLFNPGKIIN PPKMDDASNF RFPPSYKVIP LQPALDWSAW NVQNDPVTEA ITAAGTGGDP AMGLAKAVEM CNNNGHCRKF DAEVMCPSYR VTRDEKHLTR GRANTIRLAL SNQLDIQDES SPLGSDAIKE VMELCVSCKA CRRECPTGVD MAKMKIEFLS AYKKRVGHSL RDLAVAHLPQ YASIISNTPY LPTLLNLRNH VPVIAKLQEW IMGISAQRSL PVWESKTFWN QASKESKMAS YQCSPEELSK QKGVVLFADT FNAYFEDENL QAALKVLEAG GYKVHIPQKN KAKQATEAKQ ASTCSKEFCC GRTYLAAGMV DKAKSTLGEL VDHLAPYAEK NIPIIGLEPS CLFTLKDEAL VMGFGERAVT VSQRAQLLEE FLAAEVKAGK LTLPLKPSSK PVLFHGHCHQ KSFAAVTPAM ELLKLIPNAD PKLIESSCCG MAGSFGYEAE HIEVSKQMAE ASLLPAIRKS PDSWVVADGT SCRHQIADGT QREAVHIAKI LAAHL
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