Gene Pnuc_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0546 
Symbol 
ID5052885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp537748 
End bp538497 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content45% 
IMG OID640470700 
Productcytochrome c, class I 
Protein accessionYP_001155330 
Protein GI145588733 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGTA GATCTCAAGT TGCAAGCTCC CTTGTAATTG CTTTCTCCTT TTCTGTAGCA 
GCTCTTGCCG GCTGCACTTA TTTCAACAAC ATTCCCCCTG TGACAACTTT AGAAAATCCG 
ACAAGAAGCA GAACTTTAGG GGATTATGAA GTTGCGGGTA ATGTATTGGC GGTGCAGGTT 
TGTGCAGCTT GTCATGGGGT TAATGGGCAG TCTCATTCTC CTATGGTCCC CAATCTTGCT 
GGTCAGCAAA AGGATTATTT AGTAAATCAA TTACAAGACT ATCGCGATCA CAGTAGAAGT 
AATTTTTATG GGGTACGCTA TATGTGGGGA ATGGCTGGCC CATTGAAAGA TAAGCAAATT 
CAAGAATTAG CAGATTACTT TTCTAAGCAA GCCCCAATGA AAATCGCTAA TACTGGACTT 
GAAGATCCCC AACTAGTTCG TGGCAAGGAG ATTTTTGAGA AGGGCATACC AGAGCAGGGC 
GTTATTCAGT GCAATTCTTG TCATGGTCCC AACGGTGAAG GGATGGCAAC CTTTCCGAGA 
ATAGCAGGAC AGCATGCTTT CTACCTCACA CAACAGCTCA AAGTTTGGCA GCACCCCGAT 
CAAAAACGTT TTATGGAGGT TGGTGGCAAT ACCTGGGCTC CGAGGACGAT TACATTTGCT 
CGCCCCCGAG GCGTATTGAT GCAAAACAAC GTCAAGAATC TCTCTGATGC AGATGCAGAA 
GCTGTAGCTG CTTATCTAAA TACCCTGTAG
 
Protein sequence
MIGRSQVASS LVIAFSFSVA ALAGCTYFNN IPPVTTLENP TRSRTLGDYE VAGNVLAVQV 
CAACHGVNGQ SHSPMVPNLA GQQKDYLVNQ LQDYRDHSRS NFYGVRYMWG MAGPLKDKQI 
QELADYFSKQ APMKIANTGL EDPQLVRGKE IFEKGIPEQG VIQCNSCHGP NGEGMATFPR 
IAGQHAFYLT QQLKVWQHPD QKRFMEVGGN TWAPRTITFA RPRGVLMQNN VKNLSDADAE 
AVAAYLNTL