Gene Pnuc_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0534 
Symbol 
ID5053894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp523906 
End bp524214 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content43% 
IMG OID640470688 
Producthypothetical protein 
Protein accessionYP_001155318 
Protein GI145588721 
COG category[S] Function unknown 
COG ID[COG3162] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATG CTGTCGTAGC GCGCATAGAG GCTAATCCAA AATACCAAGA GCTAAAGCGC 
AAGCGCAGCT CATTTGGTTG GGCCCTCTGT ATTTTGATGT TTATTGTCTA TTACGGTTAC 
ATTGCTTTGA TCGCTTTTGA TAAGCCATTC TTGGCACAGC CAATTGGCGA TGGCGTGATT 
ACCTTGGGTA TTCCTATTGG TATGGGTGTA ATCATTTTCA CGATCCTTAT CACTGGTATT 
TACGTTCGCC GTGCGAATAA TGAATACGAC ACCTTAACTG CTGAAATTTT GAAGGATGCC 
GTTAAATGA
 
Protein sequence
MSDAVVARIE ANPKYQELKR KRSSFGWALC ILMFIVYYGY IALIAFDKPF LAQPIGDGVI 
TLGIPIGMGV IIFTILITGI YVRRANNEYD TLTAEILKDA VK