Gene Pnuc_0530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0530 
Symbol 
ID5052496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp521137 
End bp521922 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content43% 
IMG OID640470684 
Producthypothetical protein 
Protein accessionYP_001155314 
Protein GI145588717 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAATT CTCTTGTAGC TCCTTTAAGT CAATCCTTTC ATGCCCATAC ATTGGCATTT 
TTTGTTTGTG CAGTCATCAG TGTATTAATT GTTGGAATTT CTAAGAGTGG ATTTGGAGCG 
GGACTCGGAA TTCTTTCTCT ACCCTTAATG GCAAGTCAAT CGAGCATCAA TGAGGCGTTA 
GCTATTTTGC TACCCTTGCT CATCGCAATT GATTTAGTGG GCTTGCGTCG CTTTATCCGA 
AACGCCAATT GGAGAATACT CAAACTCATT TTGCCCCCTG CAATTGTGGG TTTAGCCCTT 
GGCATGTTTT TCTTTACCGC AATCACCCCA AAGGTTCTTA CGCTCTCTAT CGGAATATTT 
ACATTGCTCT TCTTAATGCA GAACCTGGCA ATGACATACT TTGATTCTAG GGAGGCGAAG 
CCCTATCCAT GGCTGGGGCG CGCTATGGGA TTAACTTCGG GATTTACTTC CTTTGTGGCG 
CATATTGGCG GCCCACCCAT TACTGTCTTT ATGTTGAGAG AAAACCTGTT GCCGATGGTC 
TATACATCAA CGCTGGGTGT TTTCTTTACC TTCATTAATT TTGGTAAGTT GGGCCCCTAT 
GCATATTTAG AGCTTCTGAA CTTTCAACAA TTAGCCACTT CGCTTTTGCT TTTGCCCTGC 
GTTCCATTTG GTGTGTATTT TGGATTCTAT TTAGCGAAGC GTATTTCGAT GAAATGGTAC 
TACCATATCG TACGATTTTT CTTGCTGGTC GCGAGCATCA AACTAATCTC AGATGGCCTG 
CTTTAG
 
Protein sequence
MFNSLVAPLS QSFHAHTLAF FVCAVISVLI VGISKSGFGA GLGILSLPLM ASQSSINEAL 
AILLPLLIAI DLVGLRRFIR NANWRILKLI LPPAIVGLAL GMFFFTAITP KVLTLSIGIF 
TLLFLMQNLA MTYFDSREAK PYPWLGRAMG LTSGFTSFVA HIGGPPITVF MLRENLLPMV 
YTSTLGVFFT FINFGKLGPY AYLELLNFQQ LATSLLLLPC VPFGVYFGFY LAKRISMKWY 
YHIVRFFLLV ASIKLISDGL L