Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0505 |
Symbol | |
ID | 5053592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 497642 |
End bp | 498670 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470659 |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_001155289 |
Protein GI | 145588692 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | [TIGR02197] ADP-L-glycero-D-manno-heptose-6-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTATTA TCGTAACTGG AGCAGCTGGT TTTATTGGTG CCAATATTGT CCAGGCGCTC AATGCGCGCG GCGAGAAAAA TATCATTGCA GTCGACGACT TACGTCCTGC CGATAAATAT CGAAATTTAG CTGATTTAGA CATTATTGAT TATCTTGATA AAGATGAATT TCTAGAGGCA TTTAGAAGCG GAAAGCTTGG TAAGATCAAA GCCGTTTTTC ATGAGGGTGC TTGTTCAGAC ACCATGGAAA CAGACGGTAT TTTCATGATG GCAAATAATT ATCGCTACAC CATGGATTTA CTTGATATCT GCACAGAGCA AAAAGTACAG TTGCTGTATG CCTCTTCAGC GGCCACCTAT GGCGGCTCTG ATGTCTTTAT CGAAAGCCGC GAGCATGAGA AGCCGCTCAA TATCTATGGC TACTCTAAGT TTCTGTTTGA CCAAGTAATG CGTAAGCGTT TTGCTGAGAA CGCAAATACA GCACAAGTAG TGGGCTTTCG GTATTTCAAT GTGTATGGCC CACGTGAGTC CCATAAAGGT CGCATGGCAT CTGTGGCTTT TCATCAATAC CATCAGTACA AGGCTAATGG CCATGTCAAA CTGTTTGGTG AGTATGGCGG CTATGGCCCT GGTGAACAAA GCCGTGACTT TGTATCCGTT GAAGACGTAG TCAAAGTCAA TTTATTCTTT TTAGACCACC CAGAAATTAG CGGCATCTTT AATTTGGGTA GCGGTCGTGC GCAGCCATTT AACGATGTTG CACATGCAGT AGCAAATGGG ATGCGTAAGC TTGACAAGGC AACCCCAGCA ACTTTGCAAG AATTGGTTAA AGAAAAAGCC ATTGAGTACA TTCCATTTCC AGATGCATTA AGAGGAAAAT ATCAGTGTTT TACCCAAGCA GACCTAACCA AGTTAAGGGC TGCAGGCTAT AAAGAGCCCT TCCTGAATGT AGAGCAAGGT GTAGGCCGAT ACATTGAGTG GCTAGAGGCG AATGCGGGGT TTTTAGCCAA TCCTTTAGAT AGCAAATAA
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Protein sequence | MTIIVTGAAG FIGANIVQAL NARGEKNIIA VDDLRPADKY RNLADLDIID YLDKDEFLEA FRSGKLGKIK AVFHEGACSD TMETDGIFMM ANNYRYTMDL LDICTEQKVQ LLYASSAATY GGSDVFIESR EHEKPLNIYG YSKFLFDQVM RKRFAENANT AQVVGFRYFN VYGPRESHKG RMASVAFHQY HQYKANGHVK LFGEYGGYGP GEQSRDFVSV EDVVKVNLFF LDHPEISGIF NLGSGRAQPF NDVAHAVANG MRKLDKATPA TLQELVKEKA IEYIPFPDAL RGKYQCFTQA DLTKLRAAGY KEPFLNVEQG VGRYIEWLEA NAGFLANPLD SK
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