Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0478 |
Symbol | |
ID | 5052517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | - |
Start bp | 468249 |
End bp | 469226 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470631 |
Product | hypothetical protein |
Protein accession | YP_001155262 |
Protein GI | 145588665 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.606939 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTTCT TCAAGTTGAT TTTCATTTCG ATCGCAGCAA TTGCAAGCCT TTCTTCTTCG GGCGCATTTG CTCAAGCAAA TTACCCAAAC AAGCCAATTA ATTTTATTGT TCCCTATGGT GCTGGCGGCG GAGCTGACTC ACGCAGCCGA CAGATTGCTC AGAAGATGAG CATCATCCTC AAGCAGCCCA TCATTGTTGA TAACAAACCT GGTGCTGGCG GCAATATTGG CACTGAATAT ATTTCAAGAG CAGCTCCTGA TGGATACACC ATCGGCATGG GAAACTTCGC GCCCATGGCA GTCAATAAGA CACTCTTTGG AAATCTCCGC TACGACCCTG AAGCGGATTT AACACCTATA GTGCTGATTG AAAAGGGTCC TTTAGTATTG GTAGTGAATC CAAACTCTCC TTATAAAACA GTACAAGATA TTGTCGCAGC TGCAAAAGCA AAACCAGGGG TACTTACCTT CTCCTCAGGC GGTATTGGTG GTAGCCATCA ACTCTCAGCA GAACTCTTTA AACAAAGTGC AGGCATTGAC ATGATTCATG TGCCCTATAA AAGTGGATCC GCTGGTTTAA CCGATTTGAT GGCGGGCAAT GTCACTATGA TGTTTGATCA GATGTACTCA GCTTTACCCA GCATCAAGGC GGACAAATTA CGCCCAATTG CAATCACCAG CAAAAAACGC TCCCCCCTCT TGCCTAGCAT TCCAACATTT GCAGAGGCTG GCTACCCTAA AGTAGAGGTT CTCAATTGGC AGGGTTTAAT TGCACCTAAG GGCACTCCAA AAGCCATTAT TGACAAACTG AATGCTGCTG CAAATGAGGC TTTAAAGGAC CCTCAATTAC GCGAACTGAT GCTTTCTCAA GGCAATGAAA TTGGCGGTGG ATCACCAGCA GAATTTGCGG CTTTAATTAA AGCTGAATCA GCTAAGTGGA GTTCAGTAGT AAAGACGGCA AATATCAAAC CAGAGTAA
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Protein sequence | MNFFKLIFIS IAAIASLSSS GAFAQANYPN KPINFIVPYG AGGGADSRSR QIAQKMSIIL KQPIIVDNKP GAGGNIGTEY ISRAAPDGYT IGMGNFAPMA VNKTLFGNLR YDPEADLTPI VLIEKGPLVL VVNPNSPYKT VQDIVAAAKA KPGVLTFSSG GIGGSHQLSA ELFKQSAGID MIHVPYKSGS AGLTDLMAGN VTMMFDQMYS ALPSIKADKL RPIAITSKKR SPLLPSIPTF AEAGYPKVEV LNWQGLIAPK GTPKAIIDKL NAAANEALKD PQLRELMLSQ GNEIGGGSPA EFAALIKAES AKWSSVVKTA NIKPE
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