Gene Pnuc_0478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0478 
Symbol 
ID5052517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp468249 
End bp469226 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content45% 
IMG OID640470631 
Producthypothetical protein 
Protein accessionYP_001155262 
Protein GI145588665 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.606939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTCT TCAAGTTGAT TTTCATTTCG ATCGCAGCAA TTGCAAGCCT TTCTTCTTCG 
GGCGCATTTG CTCAAGCAAA TTACCCAAAC AAGCCAATTA ATTTTATTGT TCCCTATGGT
GCTGGCGGCG GAGCTGACTC ACGCAGCCGA CAGATTGCTC AGAAGATGAG CATCATCCTC
AAGCAGCCCA TCATTGTTGA TAACAAACCT GGTGCTGGCG GCAATATTGG CACTGAATAT
ATTTCAAGAG CAGCTCCTGA TGGATACACC ATCGGCATGG GAAACTTCGC GCCCATGGCA
GTCAATAAGA CACTCTTTGG AAATCTCCGC TACGACCCTG AAGCGGATTT AACACCTATA
GTGCTGATTG AAAAGGGTCC TTTAGTATTG GTAGTGAATC CAAACTCTCC TTATAAAACA
GTACAAGATA TTGTCGCAGC TGCAAAAGCA AAACCAGGGG TACTTACCTT CTCCTCAGGC
GGTATTGGTG GTAGCCATCA ACTCTCAGCA GAACTCTTTA AACAAAGTGC AGGCATTGAC
ATGATTCATG TGCCCTATAA AAGTGGATCC GCTGGTTTAA CCGATTTGAT GGCGGGCAAT
GTCACTATGA TGTTTGATCA GATGTACTCA GCTTTACCCA GCATCAAGGC GGACAAATTA
CGCCCAATTG CAATCACCAG CAAAAAACGC TCCCCCCTCT TGCCTAGCAT TCCAACATTT
GCAGAGGCTG GCTACCCTAA AGTAGAGGTT CTCAATTGGC AGGGTTTAAT TGCACCTAAG
GGCACTCCAA AAGCCATTAT TGACAAACTG AATGCTGCTG CAAATGAGGC TTTAAAGGAC
CCTCAATTAC GCGAACTGAT GCTTTCTCAA GGCAATGAAA TTGGCGGTGG ATCACCAGCA
GAATTTGCGG CTTTAATTAA AGCTGAATCA GCTAAGTGGA GTTCAGTAGT AAAGACGGCA
AATATCAAAC CAGAGTAA
 
Protein sequence
MNFFKLIFIS IAAIASLSSS GAFAQANYPN KPINFIVPYG AGGGADSRSR QIAQKMSIIL 
KQPIIVDNKP GAGGNIGTEY ISRAAPDGYT IGMGNFAPMA VNKTLFGNLR YDPEADLTPI
VLIEKGPLVL VVNPNSPYKT VQDIVAAAKA KPGVLTFSSG GIGGSHQLSA ELFKQSAGID
MIHVPYKSGS AGLTDLMAGN VTMMFDQMYS ALPSIKADKL RPIAITSKKR SPLLPSIPTF
AEAGYPKVEV LNWQGLIAPK GTPKAIIDKL NAAANEALKD PQLRELMLSQ GNEIGGGSPA
EFAALIKAES AKWSSVVKTA NIKPE