| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0432 |
|---|
| Symbol | |
|---|
| ID | 5052995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 420916 |
|---|
| End bp | 421785 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640470585 |
|---|
| Product | putative formyltransferase |
|---|
| Protein accession | YP_001155216 |
|---|
| Protein GI | 145588619 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCACGCAG TCGTCTTTGC ATATCACAAT GTTGGTGTCG GTTGCCTAAA GGCACTTATT
GCGGCTGGTA TCAAAGTGGA TTTAGTAGTG ACCCACCAAG ATGATCCCAA TGAAAATGTA
TGGTTCGGTA GTGTGGCTCA GCTTTGCCAA GAAAAAAATA TTGACTGCAT CACACCTAAC
GCAAGTCAAT TGGTCGAATT GATCCCCAGG CTACGAGCAC TTGCTCCCGA TTACATTTTT
TCTTTTTACT ATCGCCACAT GATTTCCGCA GAGATCTTGG CCATTGCCAA AATTGCAGCA
CTCAATATGC ATGGCTCTCT ACTTCCTAAA TATCGCGGCC GAGCACCAGT GAATTGGGCA
ATCTTGCATG GTGAATCTGA AACTGGGGCT ACTTTGCATG TCATGGAAGC CAAACCAGAT
GCCGGAGACA TTGTTGGACA AGCCTCGGTT GCTATTGGCC CTGATGAAAC TGCCACAGAG
GTGTTTGGCA AAGTCAGTCA GGCAGCCGTA AAGGTCATTA CTCAAGTTTT ACCAGATCTC
ATTACCGGCA AAATCACCCG TAAACCCAAT GAGCTCGAAA AAGGAAGCTA TTTTGGGGGC
AGAAAGCCGT CAGACGGGCA AATTCATTGG GATCAAACAG CACTGCAGGT CCATAACCTG
GTCAGAGCAG TAGCACCCCC TTATCCAGGC GCCTTCACAG ACCATCAGGG CAAGACCATG
ATTGTCAGCA AAACAAGCCT CAAGGGGCCA TTTGCGGCCA ATCTGGATCT TGGGCTTGCG
GGCATCCAAG TGGTTGATAA TCGGGTATTC GGCATTTGCG GGGATCGCCA AGCAGTAGAA
ATCTTGGAAT GGTTCCCTGC TGGCAAATAA
|
|---|
| Protein sequence | MHAVVFAYHN VGVGCLKALI AAGIKVDLVV THQDDPNENV WFGSVAQLCQ EKNIDCITPN
ASQLVELIPR LRALAPDYIF SFYYRHMISA EILAIAKIAA LNMHGSLLPK YRGRAPVNWA
ILHGESETGA TLHVMEAKPD AGDIVGQASV AIGPDETATE VFGKVSQAAV KVITQVLPDL
ITGKITRKPN ELEKGSYFGG RKPSDGQIHW DQTALQVHNL VRAVAPPYPG AFTDHQGKTM
IVSKTSLKGP FAANLDLGLA GIQVVDNRVF GICGDRQAVE ILEWFPAGK
|
|---|
| |