Gene Pnuc_0431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0431 
Symbol 
ID5052769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp419834 
End bp420880 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content43% 
IMG OID640470584 
ProductNAD-dependent epimerase/dehydratase family protein 
Protein accessionYP_001155215 
Protein GI145588618 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TACTCATTCT TGGCGTTAAT GGCTTTATTG GCCACCACCT TTCAAAACGT 
ATTCTGGAGA CAACCAGTTG GGATGTCTAT GGAATGGATA TGCAAAATGA TCGTCTTGGC 
GACCTCATCA ATCATCCGCG CATGCATTTC TTTGAAGGTG ATATCACCAT TAATAAAGAG 
TGGGTCGAAT ATCACATTCG CAAGTGCGAT GTCATCTTGC CTTTGGTCGC TATTGCAACA 
CCAGCTACTT ATGTGCAGCA ACCACTCAAA GTATTTGAGC TTGATTTCGA AGCCAATCTT 
CCGATCGTGC GCTCTGCCGT GAAATACAAA AAGCATTTGG TCTTTCCATC TACCTCTGAG 
GTTTATGGCA TGTGCGAAGA CAGTGAGTTT GATCCGTCAA AATCGAATAT GGTTTATGGC 
CCAATCAATA AACCGCGCTG GATTTATGCC TGCTCCAAGC AACTAATGGA TCGTGTGATT 
TGGGGTTATG GCATGGAAGG CTTACGCTTC ACACTCTTCC GCCCGTTTAA CTGGATCGGT 
CCTGGCTTAG ATAGTATCTA CACTCCTAAA GAAGGCTCAT CTCGTGTTGT CACTCAGTTC 
TTGGGCCATA TTGTTCGTGG CGAACCCATC AACTTAGTAG ATGGTGGTGC GCAAAAACGC 
GCCTTTACTT ATATAGATGA CGGTATCGAT GCATTAATGC ATATCATCGC CAATAAAGAT 
GGTATTGCCA ACGGCAAGAT CTACAACATT GGTAATCCAA AAAATAATCA CTCAGTACGT 
GAATTAGCTA ATCAAATGCT CGATATTGCT CGCAGTATTC CTGAGTACGC TAAGACTGCA 
AATGATGTGA AGATTGTAGA AACGACATCG GGTGCTTATT ACGGCGAAGG TTATCAAGAC 
GTTCAAAATC GTGTGCCAGC AATTGACAAC ACGATGAGTG AATTAGGCTG GAAGCCAACA 
ACAACGATGG CTGATGCGCT CAAGAATATT TTTGAAGCCT ATCGTCAGGA TGTTGATAAA 
GCCCGTCACT TAGTCGACAA AGAATAA
 
Protein sequence
MKKVLILGVN GFIGHHLSKR ILETTSWDVY GMDMQNDRLG DLINHPRMHF FEGDITINKE 
WVEYHIRKCD VILPLVAIAT PATYVQQPLK VFELDFEANL PIVRSAVKYK KHLVFPSTSE 
VYGMCEDSEF DPSKSNMVYG PINKPRWIYA CSKQLMDRVI WGYGMEGLRF TLFRPFNWIG 
PGLDSIYTPK EGSSRVVTQF LGHIVRGEPI NLVDGGAQKR AFTYIDDGID ALMHIIANKD 
GIANGKIYNI GNPKNNHSVR ELANQMLDIA RSIPEYAKTA NDVKIVETTS GAYYGEGYQD 
VQNRVPAIDN TMSELGWKPT TTMADALKNI FEAYRQDVDK ARHLVDKE