Gene Pnuc_0423 details

Gene Information

• Locus tag: Pnuc_0423
• Symbol: rplI
• ID: 5052406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1
• Kingdom: Bacteria
• Replicon accession: NC_009379
• Strand: +
• Start bp: 411752
• End bp: 412204
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640470576
• Product: 50S ribosomal protein L9
• Protein accession: YP_001155207
• Protein GI: 145588610
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0359] Ribosomal protein L9
• TIGRFAM ID: [TIGR00158] ribosomal protein L9

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.000000011368
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATCA TTCTTTTAGA AAAAGTAACA AACTTGGGCA ACCTCGGTGA CGTAGTTCGC 
GTTAAAGACG GTTTCGCTCG TAACTTTTTA ATCCCACAAC GTAAAGCACG TCGTGCAACT 
GAAGCAGCCA TTGCTGACTT TGCAGTTCGT CGCGCTGAGT TGGAAAAATT AGCTGCTGAG 
AAATTGGCTG CTGCTGAAGC AGTTGGCACA AAGCTCAAAG ACTTGGTTCT CGAAATCGGT 
CAAAAAGCAG GTGTTGACGG TCGTTTGTTT GGTTCTGTAA CTAACCACGA TATCGCTGAT 
GCATTAAAAG CGAAAGGGTT CACGATCGAG AAGTCTTCTG TTCGCATGCC TACTGGCCCA 
TTGAAAATGG TTGGTGATCA TCCTGTTGCG GTTGCTGTTC ATACCGACGT AGTAGCAGAC 
ATCACTATTC GTGTAGTTGG CGAGCAAGCT TAA 

 

Protein sequence

MQIILLEKVT NLGNLGDVVR VKDGFARNFL IPQRKARRAT EAAIADFAVR RAELEKLAAE 
KLAAAEAVGT KLKDLVLEIG QKAGVDGRLF GSVTNHDIAD ALKAKGFTIE KSSVRMPTGP 
LKMVGDHPVA VAVHTDVVAD ITIRVVGEQA