| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0366 |
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| Symbol | |
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| ID | 5052389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 360802 |
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| End bp | 363036 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470517 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001155150 |
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| Protein GI | 145588553 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTCAG AGAAATCAAA GATTATTTAC ACGCTGACAG ATGAAGCACC GCTTTTAGCG
ACTTGCGCAT TTCTGCCCAT CATTCGTACT TTCACAGCGC CTGCTGGTGT AGAGATTGTG
AATAGCGACA TTTCTGTTGC TGCACGTATC TTGGCTGAAT TTTCTGAGTG CTTAACGACC
GAACAAAAAG TTCCTGACAA TTTGGCAGAG CTTGGCAAAA TGACTTTGAT GCCAGATACC
AACATTATTA AGTTGCCAAA TATCAGCGCC TCTGTTCCTC AGTTATTAGC TGCGATCAAA
GAATTGCAAT CAAAAGGCTA CAAGATTCCC AATTTCCCAG AAGATCCAAA AACGGATGAG
GAAAAATCGA TTCGTACGCG CTATTCCAAG TGCTTAGGTA GTTCAGTAAA TCCGGTATTG
CGTGAAGGTA ACTCTGACCG CCGTGCGCCA CCCGCTGTTA AGCGTTACGC TCGTAAAAAC
CCGCACTCCA TGGGTGAGTG GAGCCAAGCT TCCCGTACGC ACGTATCCCA TATGCATGGT
GGTGACTTCT ACTCTAGCGA GAAGTCAATG ACAATGACCA AGGCATGTGA TGTCAAGATG
GATTTAGTAA CTAAGAGCGG CAAAACGATT GTGCTCAAGC CAAAGGTCTC TTTACTTGCT
GGCGAAATTA TCGACAGTAT GAATATGAGT AAGAAAGCCT TGTGCGAGTT CTACGAAAAA
GAAATTGAAG ACGCATACAA GACAGGCATG ATGTTGTCCT TGCACGTGAA GGCAACCATG
ATGAAAGTAT CTCACCCAAT CGTATTTGGT CATGCTGTCA AGATTTTCTA CAAAGATGCT
TTTGAGAAGC ATGCGAAGCT ATTCGAAGAG TTGGGCGTCA ATGCCAATAA CGGTATGAGC
AGCCTGTATG AAAAGATTAA GACTTTGCCT GAATCTAAGC GCGAAGAAAT CATTCAAGAT
TTGCATGCAT GCCATGAGCA TCGCCCAGCA TTGGCGATGG TTGACTCTGC TAAAGGTATC
ACCAACTTGC ATTCTCCAAG TGATGTGATC GTAGATGCCT CTATGCCTGC GATGATTCGC
GTAGGCGGCA AGATGTGGGG TGCGGATGGT CGTTTGCATG ACACCAAGGC CGTGATTCCA
GAGAGTACTT TTGCCCGTAT CTATCAAGAA ATGATCAATT TCTGTAAGAC ACACGGCAAT
TTCGATCCAA CGACGATGGG TACTGTACCT AACGTGGGCT TGATGGCTCA GCAGGCTGAA
GAGTATGGTT CACACGACAA GACTTTTGAA ATTCCAGAGG CTGGTGTAGC CCGCATCGTG
GCTGATGATG GCACTGTGTT GCTTGAGCAG AACGTGGAAG AGGGCGATAT CTGGCGTATG
TGTCAGTGTA AAGATGCTCC GATTCGTGAC TGGGTCAAGT TGGCTGTGAA TCGTGCGCGT
CTTTCTAATA CCCCAGCTGT ATTTTGGCTT GATGAGTACC GCCCGCATGA AGCTGAATTG
ATCAAGAAGG TAAATACCTA CCTCAAAGAC TATGATCTTA CGGGTGTGGA TATTCAGATC
ATGTCTCAGA CTCGTGCAAT GCGTTACACC CTAGAGCGCG TCATTCGTGG CAAAGACACT
ATTTCTGTAA CCGGTAACAT CTTGCGTGAC TACCTCACTG ACTTGTTCCC AATTATGGAA
TTAGGCACCA GTGCGAAGAT GCTTTCTATC GTACCTTTGA TGGCTGGTGG TGGCTTGTTT
GAAACCGGTG CTGGTGGTTC TGCTCCGAAA CACGTTCAGC AGTTGGTAGA AGAAAACCAT
TTACGCTGGG ATTCTCTCGG AGAGTTTTTG GCTCTAGCGG TATCTCTCGA AGATATTGGC
GATAAGACAG GCAATAACAA GGTAAAAATC TTAGCCCGTA CTTTGGATGA GGCGACAGGT
ACTTTATTGG ATAACAATAA GTCACCTTCA CCACGCACCG GCGAGCTAGA TAACCGTGGC
AGTCAATTCT ATTTAGCCAT GTACTGGGCT AAGGCATTGG CAGCACAAAC TGAAGACAAA
GAATTGCAAG CTTACTTTGC ACCTTTGGCT AAAGCTTTGT CAGAAAATGA AGAGAAGATT
ACGGCTGAAT TTAAGGCAGT TCAAGGTAAG CCAGTAGATA TCGGCGGTTA CTTTGTTGCT
GATCCGGAAA AGTGCAAAGC AGTGATGCGC CCAAGCCAAA CATTTAATGC AGCTTTAAAA
GCGGCAAGAG CTTAA
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| Protein sequence | MASEKSKIIY TLTDEAPLLA TCAFLPIIRT FTAPAGVEIV NSDISVAARI LAEFSECLTT
EQKVPDNLAE LGKMTLMPDT NIIKLPNISA SVPQLLAAIK ELQSKGYKIP NFPEDPKTDE
EKSIRTRYSK CLGSSVNPVL REGNSDRRAP PAVKRYARKN PHSMGEWSQA SRTHVSHMHG
GDFYSSEKSM TMTKACDVKM DLVTKSGKTI VLKPKVSLLA GEIIDSMNMS KKALCEFYEK
EIEDAYKTGM MLSLHVKATM MKVSHPIVFG HAVKIFYKDA FEKHAKLFEE LGVNANNGMS
SLYEKIKTLP ESKREEIIQD LHACHEHRPA LAMVDSAKGI TNLHSPSDVI VDASMPAMIR
VGGKMWGADG RLHDTKAVIP ESTFARIYQE MINFCKTHGN FDPTTMGTVP NVGLMAQQAE
EYGSHDKTFE IPEAGVARIV ADDGTVLLEQ NVEEGDIWRM CQCKDAPIRD WVKLAVNRAR
LSNTPAVFWL DEYRPHEAEL IKKVNTYLKD YDLTGVDIQI MSQTRAMRYT LERVIRGKDT
ISVTGNILRD YLTDLFPIME LGTSAKMLSI VPLMAGGGLF ETGAGGSAPK HVQQLVEENH
LRWDSLGEFL ALAVSLEDIG DKTGNNKVKI LARTLDEATG TLLDNNKSPS PRTGELDNRG
SQFYLAMYWA KALAAQTEDK ELQAYFAPLA KALSENEEKI TAEFKAVQGK PVDIGGYFVA
DPEKCKAVMR PSQTFNAALK AARA
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