Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0358 |
Symbol | |
ID | 5052547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 354080 |
End bp | 354808 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470509 |
Product | ABC transporter related |
Protein accession | YP_001155142 |
Protein GI | 145588545 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTATCTA TTAAGAATCT TGAAGCAGGC TACGGCAAAG TTAAAGTCCT GCATGGCATC AGCATCGATG TACCCAAGGG CCAAGTCATT ACCTTGATTG GCTCAAACGG TGCTGGTAAA ACCACTACTA TGCGTGCCAT TACCGGCATG ATTAAGCCTA CTGGGGGTGA AGTGACTCTC AGCGGTGAAA AAATTAACGG TTATGACTCA CATAAGATTG CTCGCTTAGG TTTGGCACAC AGTCCTGAAG GTCGTCGTGT TTTCACAACC ATGTCTGTTA CTGACAACTT GTTATTAGGT GCTTTCCCGC GTTTTACTGG TAGCCGCCCA AAAGGCGATA TCAAGCATGA TTTGGAAAAA GCACTTGAAA TGTTCCCGCG CTTGAAAGAG CGTCAGTATC AGTTAGCTGG TACTTTGTCA GGTGGTGAAC AGCAGATGTT GGCGATGGCT CGTGCTGTGA TGTTGAATCC AGAAATCATT CTCTTGGATG AGCCTTCAAT GGGTCTTGCA CCGATCCTGG TGGAAGAGGT CTTTAAGATC ATTTCTAATC TCAAGTCTCA AGGCGTCACC ATGTTGTTGG TTGAGCAGTT TGCTGCCGCA GCCTTAAACG TAGCTGACTA CGGTTATGTT CTTGAGAACG GTAAGATTGC TACGCATGGC CCTGCAAGCA AACTGAAGGA TGATCCCGCT GTAAAAGCAG CTTACTTAGG TGGTGCTAGC AGTCACTAA
|
Protein sequence | MLSIKNLEAG YGKVKVLHGI SIDVPKGQVI TLIGSNGAGK TTTMRAITGM IKPTGGEVTL SGEKINGYDS HKIARLGLAH SPEGRRVFTT MSVTDNLLLG AFPRFTGSRP KGDIKHDLEK ALEMFPRLKE RQYQLAGTLS GGEQQMLAMA RAVMLNPEII LLDEPSMGLA PILVEEVFKI ISNLKSQGVT MLLVEQFAAA ALNVADYGYV LENGKIATHG PASKLKDDPA VKAAYLGGAS SH
|
| |