| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0355 |
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| Symbol | |
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| ID | 5052604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 349908 |
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| End bp | 351092 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470506 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001155139 |
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| Protein GI | 145588542 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC GTCGTCACAT TTTTGCGGTA GCTGCAGCTA CCTTGTTTGC AACTGGTGCA
TATGCCGCAG ATATTAAGGT GGGCGTTACT GGCCCGTATA CAGGTGGATC ATCCTCTATG
GGCGTGAGCA TGCGTGATGG CGTCCGTTTG GCTGCTAAAG AAATTAATGC TGCTGGCGGT
GTGAATGGCA ACAAGATTGT TTTGGTAGAA CGTGACGATG AAGCTAAAAA TGAGCGTGGC
GTTCAAATCG CACAAGAGTT AATTAATAAT GAAAAAGTAG TAGCAACATT AGGTTTTATT
AATACCGGCG TTTCATTGGC ATCACAGCGT TTTTATCAAG ACGCCAAGAT TCCTGTGTTT
AATAACGTGG CTACAGGTTC TTTAATTACT CATCAGTTCC CAAATGCTGC TGAAAACTAT
ATTTTCCGTA ACGCTGCTGC TGACAATATT CAAGCACCGA TGATTGCAAA AGAAGCCGTT
GAAAAGCGTG GCTTAAAGAA AGTGGCCATC TTGGCTGACT CTACTAACTA CGGTCAGTTG
GGTCGTGAAG ATTTGGAAAA AGCCCTGAAG ACATATGGCG TTACTCCAGT TGCTGAAGAA
AAGTTCAACT TGGGTGATGT GGATATGACC TCACAGTTGC TTAAAGCAAA AAATGCTGGC
GCTGATGTTG TTTTGACATA CGCAATCGGA CCAGAGTTGG CGCAAATTGC TAACGGTATG
GCAAAGTTGG GCTGGAAGAA ACCTATGATT GGTAGCTGGA CATTGTCAAT GGCTAGCTTT
ATTGATACTG CTGGTAAGAA TGGTGACGGT GCAACAATGC CCGAGACTTT TATTCAAAGC
CCAGCAACTA CTCCAAAACG TAAAGCGTTC GTTGATGCTT ACCTTAAAGA GTTCAAGCCT
AAGAATGGCG TGATTGCTTC TCCTGTTTCT GCTGCGCAAG GTTACGACTC TGTATACCTC
TTGGCAGCTG CAATTAAGCA AGCAAACAGC ACAGAAGGAC CAAAGATTTT GGCTGCGCTT
CAAGGTCTGA ATGCTCCAGT TGATGGCGTT GTAATGACTT ACAACAAGCC ATTCTCTGCA
ACTGATCACG AAGCGATTAA AGCAAAAGAC GTGGTGATGG GTGTAGTTGA GGGTGGACGT
GTTCAGTTCT TGAATGCGGA AGACGCAACT CCTAAGAAGA AGTAA
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| Protein sequence | MNIRRHIFAV AAATLFATGA YAADIKVGVT GPYTGGSSSM GVSMRDGVRL AAKEINAAGG
VNGNKIVLVE RDDEAKNERG VQIAQELINN EKVVATLGFI NTGVSLASQR FYQDAKIPVF
NNVATGSLIT HQFPNAAENY IFRNAAADNI QAPMIAKEAV EKRGLKKVAI LADSTNYGQL
GREDLEKALK TYGVTPVAEE KFNLGDVDMT SQLLKAKNAG ADVVLTYAIG PELAQIANGM
AKLGWKKPMI GSWTLSMASF IDTAGKNGDG ATMPETFIQS PATTPKRKAF VDAYLKEFKP
KNGVIASPVS AAQGYDSVYL LAAAIKQANS TEGPKILAAL QGLNAPVDGV VMTYNKPFSA
TDHEAIKAKD VVMGVVEGGR VQFLNAEDAT PKKK
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