Gene Pnuc_0340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0340 
Symbol 
ID5053028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp337121 
End bp337486 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content48% 
IMG OID640470491 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_001155124 
Protein GI145588527 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAA TAATCTTATT TGGCCATGGT GCGCGAGATA GTCGTTGGCG CGAGCCATTC 
GATCGGCTTG CTAGTCTGTG GCAAGAGCAA CATGCTAGTA CCCCTGTAGA ACTTGCTTTC
TTGGAAATGA TGCAACCTTC TTTAGAGGAA GCTGTTACTG CATTGGCAGC CAAGGGTGCC
ACTCAAATTA CTATCGTGCC GGTATTTTTT GGCCAAGGCG GTCATTTACG CAATGACTTT
CCGGTGCTGC TGCAGGCTTG CCAGGAAAAA TTTCCGGCAG TTTCTTTAAG CGCGACGCTT
GCCGTTGGTG AGGATTTAGG GGTTTTGCAA GCGATCATTG ATTTTGGATC ACAAAAAATA
TCCTGA
 
Protein sequence
MKAIILFGHG ARDSRWREPF DRLASLWQEQ HASTPVELAF LEMMQPSLEE AVTALAAKGA 
TQITIVPVFF GQGGHLRNDF PVLLQACQEK FPAVSLSATL AVGEDLGVLQ AIIDFGSQKI
S