Gene Pnuc_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0330 
Symbol 
ID5053278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand
Start bp324963 
End bp325385 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content42% 
IMG OID640470482 
Productacid phosphatase/vanadium-dependent haloperoxidase related 
Protein accessionYP_001155115 
Protein GI145588518 
COG category[S] Function unknown 
COG ID[COG1963] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAT TTTCATACAT ACTTATTCCT TTTCTGGCTT GGCTGGTTGC AGGAATCTTG 
AAGTTCTTAA TTAATAGCTT GAGAGCGCGT CGTTTTGCTT TTGACTTAAT TGGTTATGGT
GGGTTACCCA GCAACCACAG TGCTATCGTT TCAAGCATTG CTATGCTCAT TGCCTTGAGG
GAGGGGATTA ATAATCCTGC TTTTGGTGTT GCTATTGCAC TGGCCTTCAT CGTAATTCTA
GATGCCAGCA GTTTGCGTAG GCAAGTAGGC AAGCATGCCT CTGCAATTAA CAAGTTAAAT
TCTCTAAATG CATCTCATGC ATCTTTCTTG CGTGAGCGCA TGGGGCATAC ACGCATCGAA
ATTTTAGCTG GCGTGCTTAC TGGGTTAGCA GTAGCTTATT CGGTAAATTT TCTAGCTAGT
TGA
 
Protein sequence
MKEFSYILIP FLAWLVAGIL KFLINSLRAR RFAFDLIGYG GLPSNHSAIV SSIAMLIALR 
EGINNPAFGV AIALAFIVIL DASSLRRQVG KHASAINKLN SLNASHASFL RERMGHTRIE
ILAGVLTGLA VAYSVNFLAS