Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0329 |
Symbol | |
ID | 5053290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 324082 |
End bp | 324966 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640470481 |
Product | phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase |
Protein accession | YP_001155114 |
Protein GI | 145588517 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTG AAAAAACTGG ATTTAGTCTG AAGGACCGCT TAATTGCGCT TATAAAGCTA TTAAGACCAA AGCAATGGGT AAAAAATGGC TTTGTTTTTG CGCCTTTAGT ATTTTCGGGT GAGATGCTCA ATACATATGC ACTAGCCCAA GCCTCTCTGG CTGCTTTCTT TTTTTGTATG GCATCGTCTG CAACTTATAT AGTGAATGAT ATTCATGACA TAGACCATGA TCGTCGGCAC CCTAAAAAGT CCACATCACG CCCTCTAGCT TCAGGCATTG TTTCTAAAAA TGCTGCTTTA GTTGTTTTGG CGGCCCTTTA TATCGTTTTG GCTCTTGGGT ATTTGGTAAT GCCAAAGGTT ATTTTGGTAA TTGTTGCTTA TGCTGTCTTA AACCTTGCCT ATACCTTTGT CTTAAAGCAC GAGCCAGTTA TTGATATTTT TACTATCGCT ATAGGCTTTG TTTTGCGTGT TATTGCAGGT GCTACTGCCC TGAATTTAGA TCCATCAGCT TGGATGTGCG TCACAACTCT ATGCTTGGCT TTGTATTTGG CGGCAGTAAA ACGTCGCCAG GAGCTTGCTC AAAGTGGGTC TGATGGCCGT AAGGTTTTGC AAAAATATTC AGTATCGCTG GTGGACCGCT ACGCAGAAAT GTCTGCGACT GGCGCTTTAC TTTTTTATAG CATGTTTGTA ATGTCAGCCC GTCCTGCATT AGTCATTACC ATTCCATTAG TTTTATTCGG TCTTTTTCGC TATTGGTACG TAGTTGAAGC TCTCGATGGG GGCGAGTCTC CAACTGATGC TTTGCTGGCT GACTGGCAAT TAATGGCGGT AGTGGTTCTT TGGGTCGCCA CTTGTGTTTT TGTTCTCTCC GGATTTAGTC TATGA
|
Protein sequence | MKIEKTGFSL KDRLIALIKL LRPKQWVKNG FVFAPLVFSG EMLNTYALAQ ASLAAFFFCM ASSATYIVND IHDIDHDRRH PKKSTSRPLA SGIVSKNAAL VVLAALYIVL ALGYLVMPKV ILVIVAYAVL NLAYTFVLKH EPVIDIFTIA IGFVLRVIAG ATALNLDPSA WMCVTTLCLA LYLAAVKRRQ ELAQSGSDGR KVLQKYSVSL VDRYAEMSAT GALLFYSMFV MSARPALVIT IPLVLFGLFR YWYVVEALDG GESPTDALLA DWQLMAVVVL WVATCVFVLS GFSL
|
| |