| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0303 |
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| Symbol | |
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| ID | 5053085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 293320 |
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| End bp | 294297 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640470455 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001155088 |
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| Protein GI | 145588491 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.6044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCGATTC ATTTAAGTCA AAAAATTTAT GTAGCCGGCC ACAGAGGCAT GGTTGGTTCT
GCCATTGTTC GTACCTTGAA AGAAAAGGGT TACGAGAACA TCATTACTCG TACACATGCT
GAGCTCGATT TAATCAATCA AGCTGCCGTT CAAGCATTTT TTGAGACAGA AAAACCCGAT
CAAGTCTATT TGGCTGCAGC AAAAGTAGGC GGCATTTATG CAAACAATAC TTTTCCAGCG
GAATTTATTT ATCAAAATCT GATGATGGAA TCCAATGTAA TTCATCAGGC TTTTGTTTCT
GGCGTTAAGA AGCTCCTCTT TTTGGGTTCA AGCTGTATTT ATCCTAAATT GGCACCGCAG
CCAATGGCTG AAGATGCATT ATTAACGGGA TTACTCGAAT CGACCAATGA ACCTTATGCA
GTCGCTAAAA TTGCCGGCAT TAAGTTATGT GAAAGTTATA ACCGCCAATA TGGTGCCTCC
CATGGCATTG ACTATCGTTC GGTGATGCCA ACTAATTTAT ATGGTCCTGG TGATAACTAT
CATCCAGAGA ATAGCCATGT GATTCCAGCT TTGATAAGAC GTTTTCATGA AGCTAAGGAA
AGTAAGTTAC CCACAGTGAC TATTTGGGGC ACAGGAACCC CTAGGCGTGA GTTTCTTTAT
GTTCATGACA TGGCTGCGGC ATCAGTATTT GTGATGGACT TAGATAAGTC AATTTACGAC
CAACAAACAG AACCGATGTG CAGCCATATT AATGTTGGCT ATGGCGCTGA TGTAACGATT
GCGGAGCTAG CAAATGCAGT TGGTGCAGCT GTAGGTTATC AAGGTAATAT CGACTTTGAT
CCTACCAAGC CCGATGGAAC TCCGCGTAAA TGGATGGACT CCTCCAGGTT AAATCGGTTG
GGCTGGAATC CATTAGTCAA TTTGAATGAT GGCCTGCAAT CTGCCTATCA AGAATTTTTG
CAGAGAACAA CTAAATAA
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| Protein sequence | MSIHLSQKIY VAGHRGMVGS AIVRTLKEKG YENIITRTHA ELDLINQAAV QAFFETEKPD
QVYLAAAKVG GIYANNTFPA EFIYQNLMME SNVIHQAFVS GVKKLLFLGS SCIYPKLAPQ
PMAEDALLTG LLESTNEPYA VAKIAGIKLC ESYNRQYGAS HGIDYRSVMP TNLYGPGDNY
HPENSHVIPA LIRRFHEAKE SKLPTVTIWG TGTPRREFLY VHDMAAASVF VMDLDKSIYD
QQTEPMCSHI NVGYGADVTI AELANAVGAA VGYQGNIDFD PTKPDGTPRK WMDSSRLNRL
GWNPLVNLND GLQSAYQEFL QRTTK
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