Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0302 |
Symbol | |
ID | 5052064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 292163 |
End bp | 293293 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470454 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_001155087 |
Protein GI | 145588490 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.20432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGCA AACAAAAAGT CGCCCTCATC ACCGGTATCA CTGGCCAAGA TGGTTCTTAC CTAGCTGAGT TTTTATTGGA AAAAGGCTAC ATCGTTCACG GTATTAAGCG TCGCGCCTCT TCTTTTAATA CCGAGCGCAT TGATCATCTC TATCAAGATC CGCACGTTAA TCACCCCGAT CTTATTCTTC ACTATGGCGA CTTAACCGAT ACCAGTAATT TGGTTCGCAT CATCCAGCAG ACTCAACCGG ATGAGATTTA TAACTTAGGC GCTCAGTCTC ATGTAGCCGT TTCATTTGAA TCTCCTGAGT ACACTGCTGA TGTGGATGCG ATTGGTCCTT TGCGTATGCT AGAAGCCATC CGTATCTTGG GTTTAGAGAA GAAAACCCGT TTTTATCAAG CCTCGACTTC TGAGCTCTAT GGTTTGGTGC AAGAAATTCC ACAAAAAGAA ACCACCCCTT TTTATCCGCG TAGTCCATAT GCAGTAGCAA AGATGTATGC CTACTGGATT ACCGTGAACT ATCGTGAGGC TTATGGCATT TATGCCTGTA ATGGTATTTT GTTTAACCAT GAATCTAAGC GCCGCGGTGA AACTTTTGTT ACCCGCAAAG TAACCCGTGG TTTAGCCAAT ATTGCTCAAG GTCTTGAGAA GTGCCTCTTT ATGGGAAATA TCGATGCGCT ACGTGACTGG GGTCACGCTA AAGACTATGT TCGTATGCAG TGGCTCATGC TCCAACAAGA CAAGCCAGAA GATTATGTCA TTGCTACTGG CGTCCAATTT ACTGTGCGTG AATTTATTAC CCGCAGCGCT CAGCAACTTG GTATTACTCT GAAGTTTGAA GGCGTTGCTG AAAATGAGAA AGCCATCGTA GCTGCTATCG AAGGCGATAA AGCCCCTGCT TTAAAAGTGG GTGATGTGAT TGTGCAAATT GATCCGCGCT ACTACCGCCC AACTGAAGTG GAGACACTCC TGGGTGATCC AGCTAAGGCA AAAGCAAAAC TGGGCTGGGT TCCAGAAATT ACTTTGGACC AAATGATCGT AGAGATGGTA GCTAATGACT TGGACAAGGC TAAGCAGCAT GCGCTATTGC TCAAACATGG TCATAGCGTA GCAGTGGGTA AAGAAAATTA A
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Protein sequence | MTSKQKVALI TGITGQDGSY LAEFLLEKGY IVHGIKRRAS SFNTERIDHL YQDPHVNHPD LILHYGDLTD TSNLVRIIQQ TQPDEIYNLG AQSHVAVSFE SPEYTADVDA IGPLRMLEAI RILGLEKKTR FYQASTSELY GLVQEIPQKE TTPFYPRSPY AVAKMYAYWI TVNYREAYGI YACNGILFNH ESKRRGETFV TRKVTRGLAN IAQGLEKCLF MGNIDALRDW GHAKDYVRMQ WLMLQQDKPE DYVIATGVQF TVREFITRSA QQLGITLKFE GVAENEKAIV AAIEGDKAPA LKVGDVIVQI DPRYYRPTEV ETLLGDPAKA KAKLGWVPEI TLDQMIVEMV ANDLDKAKQH ALLLKHGHSV AVGKEN
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