Gene Pnuc_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0220 
Symbol 
ID5053078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp218517 
End bp219482 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content44% 
IMG OID640470372 
Productmagnesium and cobalt transport protein CorA 
Protein accessionYP_001155005 
Protein GI145588408 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0598] Mg2+ and Co2+ transporters 
TIGRFAM ID[TIGR00383] magnesium Mg(2+) and cobalt Co(2+) transport protein (corA) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAACT TGTTCGTCCT GCAAAATGGC CGCCTCTCTC AAGAGCAAGT CGAAGATCGC 
AATGAATTGT TGCAATATGC TAATCCTATT TGGATCGACG TTGTTGATCC AGAGGAGGAA 
GAGCTTATTT GGATTAAAGA GGCTTTTGGC GTTCTTTTGC CAGAACTAGA TGACTTGGGC 
GACTTAGAAG CATCTGCTCG TTACTTTGAG GCCGATGACG GCCATCTCCA TATTCGCACT 
GATTTCTTGT TGGATGAAGA AGAAACTTCT CGCAACGTTC GAGTTGCGTT TGTGCTAACC 
AAGAATGTCT TGTTCTCAAT TCATGATGAA GATTTACCGG TATTCCGCCT AGTCCGTTTA 
CGCGCTCGTC TGCGCCCTGG ATCAGTGAGC AATGCAAAAG ATGTATTGCT AGATCTCTAC 
TCAACCGATG CCGAATATTC TGCAGACGCC TTAGAGGAAG TTTATGAAAA TCTAGAGGCT 
GCTGGGAAAC AAGTCTTGCA AGACGACATT AACGATGCTG ACGCAGAGCA AGTGCTCGAG 
ACAATCGCAA AAGAAGAGGA TACCAATGGA CGTATTCGGC GCAATGTGAT GGATACCCGC 
CGAGCCTTAT CCTTTTTGAT GCGGAGCAAA CTCCTATCAG ATGAGCAGCA AGAGGAAGCG 
CGTCAAATTT TGCGCGATAT TGATTCCTTG GAAAACCATA CTGCCTTCCT CTTCGATAAG 
ATCAACTTCT TAATGGATGC AACGGTCGGC TTTATTAATT TGAACCAGTC CAAGATTATT 
AAGATCTTCT CGGTGGTATC TGTTGCCTTA ATGCCACCTA CTTTGCTTGC TAGCATTTGG 
GGGATGAATT ATAAAAATAT CCCCGAGTTG GATTTATCTT GGGGGTATCC AATGGCCCTG 
GTTGCAATGT TAATTTCTGC GATTATTCCT CTGTGGTACT TCCATCACAA AGGCTGGATG 
AAATAA
 
Protein sequence
MINLFVLQNG RLSQEQVEDR NELLQYANPI WIDVVDPEEE ELIWIKEAFG VLLPELDDLG 
DLEASARYFE ADDGHLHIRT DFLLDEEETS RNVRVAFVLT KNVLFSIHDE DLPVFRLVRL 
RARLRPGSVS NAKDVLLDLY STDAEYSADA LEEVYENLEA AGKQVLQDDI NDADAEQVLE 
TIAKEEDTNG RIRRNVMDTR RALSFLMRSK LLSDEQQEEA RQILRDIDSL ENHTAFLFDK 
INFLMDATVG FINLNQSKII KIFSVVSVAL MPPTLLASIW GMNYKNIPEL DLSWGYPMAL 
VAMLISAIIP LWYFHHKGWM K