Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0218 |
Symbol | |
ID | 5053356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 216857 |
End bp | 217594 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640470370 |
Product | monofunctional biosynthetic peptidoglycan transglycosylase |
Protein accession | YP_001155003 |
Protein GI | 145588406 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTGGC TTTCTTATCC AATCAAATGT TTATGCTGCG CCTTTTTGGC TATGCAACTC TTTTTTGCAA TCCAGATTGC TTTATGGACG ACCCTAGATC CCAGTACTAC CGCTTTTCAA AGGGCTGAGC GCTGGCGCTT ATGTGGCTTG CATTGGTCCT GCCCTGTGTA TTCCACATGG ACGCCTTACA CCCAGATTTC CAATAACCTC AAACGGGCAG TATTGGTCAG CGAAGATGAT ATTTTCTTTC AGCACAAAGG GGTGAGAGTA GAGGATATGC AAAAGGCCTG GGAGAAGAAT CAACAAAAAA CACAAGCGGG CGCTAAAGCT AAAGTAGCTC TGCGCGGTGG CTCTACTATT ACGCAACAAC TGGCAAAAAA TCTTTTCTTA TCCTCAGAGC AAAATTATTT CCGCAAAGGA CAAGAGCTCA TCATTACAGG CTTTTTAGAG TTAATTCTCT CTAAACAGCG CTTGTTTGAG ATTTACTTAA ATTCAGTAGA GTGGGGAGAA GGGATCTTTG GAGTTGGTGC TGCCTCTAGG CACTATTACA ACACTTCCCC AACTGTATTG GATCGCGAAC AAGCAGCGGC TTTAGCATCT GCTTTGCCTG CACCTAAGTG TTTTGATAAG CAGCAGTATT GCCGTCGAGG AAGTATTAAC TATTCAAGCC GCCAAGAATT TATTTTGGAA AATATGGATC GAGTTGCTTT AGCCCCTTAT CCCAAAAGTG GGAAATAG
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Protein sequence | MRWLSYPIKC LCCAFLAMQL FFAIQIALWT TLDPSTTAFQ RAERWRLCGL HWSCPVYSTW TPYTQISNNL KRAVLVSEDD IFFQHKGVRV EDMQKAWEKN QQKTQAGAKA KVALRGGSTI TQQLAKNLFL SSEQNYFRKG QELIITGFLE LILSKQRLFE IYLNSVEWGE GIFGVGAASR HYYNTSPTVL DREQAAALAS ALPAPKCFDK QQYCRRGSIN YSSRQEFILE NMDRVALAPY PKSGK
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