Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0170 |
Symbol | |
ID | 5052542 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 165890 |
End bp | 166747 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470322 |
Product | polypeptide-transport-associated domain-containing protein |
Protein accession | YP_001154955 |
Protein GI | 145588358 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1589] Cell division septal protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000748343 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAATT TCATGGACCG GTTCGGCGAA ATTTTCGCCA TGCTCATGTC TCCGCTCTGG AATCATCCAG ATCGGATGCA AAAGCTCAGC CGTTTCTTGA TGCGCTGTTT TGCTGTGATG CTTACTATCG GAATATTGGT ATGGCTCAGT CAGCGGCCTG TTTTTGCCTT AAAGCAAATT CAAATTGAAC CAGTAGCAGG GCAGACCTTA AAGCATATTA ATAAATCGAT GGTGAAGCAG CAGGTTCTGG AAACTGTGCA GGGCAATTTC TTCAGCGTAC GTTTAGAGGA TGTCAAACGT GGCTTTGAGA GCATGCCTTG GGTGCGACAT GCCAATGTTC GACGAGTTTG GCCTAATGGC CTGATTGTCA GCATTGAAGA GCAAAAGCCA TTTGGTACCT GGGGCGGGGC TGATAGCCAT GTCTTAATTA ATAATCATGG CGAAATTTTT GCTGGTCGAG TTTCTGAAAT AAATGATGAT GTGATTTTGG TAGATTTTCG TGGGCCGGAA GATTCCGGGC CAGAAGTCAT GAGTCTTTAT GAAAAAGCGA ACAACTGGTT TAAGCCTTGG GGTGCAGAGG TAGTGAGCCT TGCTTTGACC GAGCGCTATG CCTGGCACAT CAAATTATCT AATGGCATGA AAGTGGAATT TGGGCGCGAT GAAGAGAGCT CTGATAAGAC GCTGACAGAA GAACGTGTAG CGCGACTGTT TAAGTATTGG CCACAGGTTC AGGAGAAGTG GGCTAATCGA GTAGATGCAG TAGATCTGCG TTATGCAAAT GGTTTTGCAG TTCATCTTGC CTCTGCAAGT ATGAAAAAAA ATGATGTTGA CGGCAAAAAA AGTGAGCTGA AGCAATGA
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Protein sequence | MSNFMDRFGE IFAMLMSPLW NHPDRMQKLS RFLMRCFAVM LTIGILVWLS QRPVFALKQI QIEPVAGQTL KHINKSMVKQ QVLETVQGNF FSVRLEDVKR GFESMPWVRH ANVRRVWPNG LIVSIEEQKP FGTWGGADSH VLINNHGEIF AGRVSEINDD VILVDFRGPE DSGPEVMSLY EKANNWFKPW GAEVVSLALT ERYAWHIKLS NGMKVEFGRD EESSDKTLTE ERVARLFKYW PQVQEKWANR VDAVDLRYAN GFAVHLASAS MKKNDVDGKK SELKQ
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