| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0162 |
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| Symbol | |
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| ID | 5053298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 155324 |
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| End bp | 156874 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640470314 |
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| Product | UDP-N-acetylmuramyl-tripeptide synthetase |
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| Protein accession | YP_001154947 |
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| Protein GI | 145588350 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGGTGG CTTTGAATAT AGAACCCAAT GACTTGATTG ATCACCTGCA CACCTTAGCA
AATTCTTCCG CAAAGGTCGG TGCGGATAGT CGTCAGATTC AGTCTGGCGA TATCTTTTTT
GCATACCCAG TAGGTCATGG AGCGGCATTG CGTGACGGCC GTCAATTTAT TGAAGCTGCT
TTGGCTAATG GTGCGGCAGC AGTGGTATTT GATCCAGCTG GTATCGATCC ACAATTTCAG
GATCATCCTC AGTGTTTTGC AGTTGAGTCT TTAGCTGAGA AGGTAGGGGA ATTTTGTGCG
CAGTGGTATG ACTATCCAAG CAAGCAATTA AAAGTAATCG GCGTTACTGG AACTAATGGT
AAAACTAGTA TTACTCAGTG GTTGGCTCAA GCATTAGATG AGCCCAATCA CCGCACTGCA
GTATTGGGTA CATTGGGCAC TGGTTTTCCG ACTGCCTTGG TAATGACTGG CTATACCACT
CCTGATGCGC CTAAATTGCA AACACAGCTA AGAGAGTTAT TAGATGGGGG TGCCCAGCAA
GTTGCCATGG AAGTGTCATC ACATGCTTTG CATCAAGAGC GTATTGCAGG TACTTGGTTT
AATTGTGCTG TATTTACTAA TTTGACGCAA GATCATTTGG ACTATCACGG CAGCATGGGT
GATTATGCTG AAGCAAAAGC AAAGTTATTT CAGCAAGCGG GTCTTGAACA TGCGGTGATT
AATCTGGATG ATCCGTTCGG TCGGGAATTG GCAATCAATC TTTTGGCCAA AGATAGTATT
CAGGTGTGGG CTTATGGGTT AGCACCAACT GCATTCAAGG GCTTTGAAAA ATTTGCTAGT
CGCTTGCAGC GTATTTATAC GCAAGACACG GTTTTAAGTG GTGCGACTTA TCAAACAACC
TTTGTATATG GGGATAAGGG TACTTACCCT TTGCATATTC CTTTGCTGGG TGAATTTAAT
TTAAGCAATG CGCTTGCAGT TTGGACTGTT TTACTTACCC AAGGCCTTTC TCCTGAGGAG
GCCACTAAAC GAGTAAGTCA TTTAAGTCCT GTATCAGGGC GCATGGAATT AATCCCTTTA
GGCAAAAACC AAAAATCAGA AGGCTTACTG GCAGTGGTTG ATTACGCCCA TACGCCGGAT
GCCTTACAAA AAACTTTGCA GGCTTTAAGA CCTCTTGCTG AGCAGCGCGG TGGAAAACTT
TGGTGCGTTT TTGGATGCGG CGGTGATCGT GACATTACTA AGCGTCCACA AATGGGATTA
GTTGCTGAGA AATTTGCTGA TCACATCATT ATTACCAGTG ATAATTCACG CTCTGAAGAT
CCTCAGGCGA TTATCCAGAT GATTGCCGAT GGGCTAAATC CATCAACTAC CAATGTACAG
ATGATTGCTG ATCGGGCTGC TGCAATCATG GCTGCTGTTC GCCATGCGGA TGCGCGCGAT
ATTGTTTTGG TTGCTGGTAA AGGCCATGAG ACTTCTCAAG AGATTAATGG CAAGACATTT
GATTTTTCTG ACCAAGAACA CATTCGCTTA GCGGCTGGAG GGTTGGTCTG A
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| Protein sequence | MRVALNIEPN DLIDHLHTLA NSSAKVGADS RQIQSGDIFF AYPVGHGAAL RDGRQFIEAA
LANGAAAVVF DPAGIDPQFQ DHPQCFAVES LAEKVGEFCA QWYDYPSKQL KVIGVTGTNG
KTSITQWLAQ ALDEPNHRTA VLGTLGTGFP TALVMTGYTT PDAPKLQTQL RELLDGGAQQ
VAMEVSSHAL HQERIAGTWF NCAVFTNLTQ DHLDYHGSMG DYAEAKAKLF QQAGLEHAVI
NLDDPFGREL AINLLAKDSI QVWAYGLAPT AFKGFEKFAS RLQRIYTQDT VLSGATYQTT
FVYGDKGTYP LHIPLLGEFN LSNALAVWTV LLTQGLSPEE ATKRVSHLSP VSGRMELIPL
GKNQKSEGLL AVVDYAHTPD ALQKTLQALR PLAEQRGGKL WCVFGCGGDR DITKRPQMGL
VAEKFADHII ITSDNSRSED PQAIIQMIAD GLNPSTTNVQ MIADRAAAIM AAVRHADARD
IVLVAGKGHE TSQEINGKTF DFSDQEHIRL AAGGLV
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