| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0146 |
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| Symbol | trpD |
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| ID | 5052284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | - |
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| Start bp | 139792 |
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| End bp | 140817 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640470298 |
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| Product | anthranilate phosphoribosyltransferase |
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| Protein accession | YP_001154931 |
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| Protein GI | 145588334 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0547] Anthranilate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01245] anthranilate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.422035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCCATTA CCCCCCAAGA AGCCCTTCAG CGTTGCATTG AACATCGTGA GTTATTCCAT
GATGAAATGA CAGACATGAT GCGTCTGATC ATGAGTGGTG AGATGGCGCC TGAGTTGGTA
GCTGGCCTCT TGGTCGCATT GCGCACTAAA AAAGAAACAG TGGGTGAAAT CGCTGCCGCT
GCACAGGTGA TGCGTGAATT TGCAACCTCA GTACATATTG ATGATCGTTC GCACTTAGTT
GATGTTGTAG GGACTGGTGG CGATGGCGCC CATACTTTCA ACATTTCGAC TGCTGCGATG
TTTGTCGCGG CAGCAGCTGG TGCAAAAATT GCTAAGCACG GAAATCGCAG TGTCAGCAGC
AAATCTGGTA GTGCCGATGT ATTAGAAGCC TTGGGCGCTA ACTTGGCCCT TTCTGCTGAG
CAAGTAGCCA AATGCATTTC AACGGTGGGC GCAGGATTTA TGTTTGCCCC TAACCATCAC
CCAGCAATGA AGAATGTTGT TCCTATTCGC AAGCAATTGG GTGTGCGCAC TATCTTTAAT
ATCCTAGGGC CCCTCACCAA TCCAGCCGAT GCGAAGCGCA TTCTGATGGG AGTGTTTCAT
GCCGATCTTG TCGGCATCCA AGCTCGCGTA TTACAAGCCT TAGGCATGGA GCATGCCCTC
GTTGTTTATG GACGCGATGG ATTAGATGAA ATCTCGCTTG AAGGTCCTAC ATTGGTAGGC
GAGCTAAAAG ATGGTGTTGT GCGGGAATAT GAAATTCATC CAAAAGACTT TGGTCTACAT
ACAGCTCCCA CTAATAGCTT TAAGGTAGCT AATGCAGAAG AATCTAAGAG AATTGTTCTA
GACGTCATTG ATAACAAACC GAGCGCAGCC AGCGATATCG TCTGTCTAAA CGCAGGTGCA
ACCCTTTACG TAGCCGGTAT TGCCCCTGAT ATTGCTAGCG GTATTGCAAA GGCTAAAGCA
GCTATCGCTT CTGGTGCTGC ACGTCAAAAA TTAGACGCCT TTGTTGCTGC GTCTCAATCA
AACTAA
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| Protein sequence | MSITPQEALQ RCIEHRELFH DEMTDMMRLI MSGEMAPELV AGLLVALRTK KETVGEIAAA
AQVMREFATS VHIDDRSHLV DVVGTGGDGA HTFNISTAAM FVAAAAGAKI AKHGNRSVSS
KSGSADVLEA LGANLALSAE QVAKCISTVG AGFMFAPNHH PAMKNVVPIR KQLGVRTIFN
ILGPLTNPAD AKRILMGVFH ADLVGIQARV LQALGMEHAL VVYGRDGLDE ISLEGPTLVG
ELKDGVVREY EIHPKDFGLH TAPTNSFKVA NAEESKRIVL DVIDNKPSAA SDIVCLNAGA
TLYVAGIAPD IASGIAKAKA AIASGAARQK LDAFVAASQS N
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