Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0110 |
Symbol | hisH |
ID | 5053364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 105895 |
End bp | 106557 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470262 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_001154896 |
Protein GI | 145588299 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.179013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCGCAAA CCATTGCGAT CGTTGATTAT GGAATGGGCA ACCTTCGTTC CGTATATCAG GCATTTCATC ATGTGGCACC CGATGACAAT GTATTGATTG CCCATAAGCC AGAAGAAATT CTTTCCGCCG ATCGCGTTGT ATTGCCTGGT CAGGGTGCTA TGCCTGATTG CATGAAGCAT CTTGAAGAAT CTGGTTTGCT AGAAGCCTTG CTTGAAGCGT CTAAAAATAA GCCACTTTTA GGGGTGTGTG TTGGCGAGCA AATGCTGTTT GATCAAAGCG CTGAAGTGCG GGTTAGTGAA AATGGTAAAT GGACACCTTG CCTGGGTTTG ATCCCTGGAG AAGTACGCCG CTTTGAATTG GCCGGCAAAA AGCAAGCTGA TGGTTCGGCC TATAAGGTTC CCCATATGGG CTGGAACCAG GTGCGCCAAG ACCGCAGCCA TCCTATTTGG GACGGTATTC CAGATCTCAC TAGCTTTTAT TTTGTCCATA GCTATTATGT TGTGCCGCAA CGCAAGGAAG ATATTGCAGG GTCAACAGAA TATGGCGATT GGTTTGCATC TGCCGTGGCG CGAGATAATA TTTTTGCAAC TCAATTTCAC CCAGAAAAAA GTGCAGAATA CGGATTAAAG CTTTATAAAA ATTTTGTTTC TTGGCAACCT TAA
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Protein sequence | MAQTIAIVDY GMGNLRSVYQ AFHHVAPDDN VLIAHKPEEI LSADRVVLPG QGAMPDCMKH LEESGLLEAL LEASKNKPLL GVCVGEQMLF DQSAEVRVSE NGKWTPCLGL IPGEVRRFEL AGKKQADGSA YKVPHMGWNQ VRQDRSHPIW DGIPDLTSFY FVHSYYVVPQ RKEDIAGSTE YGDWFASAVA RDNIFATQFH PEKSAEYGLK LYKNFVSWQP
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