| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0075 |
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| Symbol | rpsM |
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| ID | 5052384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 71888 |
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| End bp | 72253 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640470227 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001154861 |
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| Protein GI | 145588264 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.679156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACGTA TCGCTGGGGT AAACATCCCA AATCATCAAC ATACTGTTAT CGGTTTAACA
GCAATTTTTG GCATTGGCAC AACTCGTGCT AACAAAATTT GCCAGACCAC AGGTGTTGCT
ATCGACAAAA AAGTTAAAGA TCTTACTGAC GCTGACTTGG AAAAGTTGCG TGATGAAGTA
GGTAAGTTCA TCACCGAGGG TGACCTTCGT CGTGAAGTAA CTATGAGCAT CAAGCGTTTG
ATGGACTTAG GTTGCTATCG TGGTGTACGT CATCGTAAGG GCTTGCCTGT ACGTGGTCAA
CGTACTAAGA CAAACGCTCG TACCCGTAAG GGCCCGCGTA AGTCTGGCGT GCAACTGAAG
AAATAA
|
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| Protein sequence | MARIAGVNIP NHQHTVIGLT AIFGIGTTRA NKICQTTGVA IDKKVKDLTD ADLEKLRDEV
GKFITEGDLR REVTMSIKRL MDLGCYRGVR HRKGLPVRGQ RTKTNARTRK GPRKSGVQLK
K
|
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