| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0073 |
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| Symbol | |
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| ID | 5052466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009379 |
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| Strand | + |
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| Start bp | 70151 |
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| End bp | 71488 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640470225 |
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| Product | preprotein translocase, SecY subunit |
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| Protein accession | YP_001154859 |
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| Protein GI | 145588262 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.867918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTAG CACCTACCAA TAGCGCAAGC ACTTCAACAG CAGGAGGCAA GTTTGGCGAG
TTACGCCATC GCTTGATTTT CCTGGTGTTG GCTCTGCTCG TGTTCCGTTT GGGTGCTCAT
ATTCCTGTTC CAGGAATTGA TCCTGACCAG TTAGCGCAGT TATTTGCCGG TCAAAAAGAT
GGCATCTTGG GAATGTTTAA TTTATTCTCC GGTGGCGCCT TATCCCGCTT TACTGTATTT
GCTTTAGGGA TCATGCCTTA TATCTCTGCA TCGATCATCA TGCAGTTGAT GACTATTGTT
GTTCCTTCGC TTGAGTCTCT GAAAAAAGAA GGTCAGGCTG GACAACGCAA GATTACGCAA
TACACCCGTT ACGGCACAGT ATTCTTAGCA ACCTTCCAAG CATTGGGCAT TTCAGTTGCA
TTGCAGGCTC AGCCAGGTTT AGTAATCAAT CCAGGCTTGA CGTTTGAAGT AAATACGGTT
GTTACTTTGG TTACCGGAAC TATGTTCTTA ATGTGGTTGG GCGAGCAAAT TACTGAGCGC
GGCTTGGGTA ACGGTATTTC GATCATTATT TTTGGTGGTA TTGTTTCTGG CCTGCCAAAT
GCATTGGCAA GTTTATTAGA GCTAGTTCGT ACTGGTTCGA TGAATATCAT TTCAGCTCTC
TTGATCGTTG TGATCGTGGC AGCAGTTACT TATTTTGTGG TGTTTGTAGA GCGCGGTCAG
CGCCGCATCT TGGTGAACTA CGCTAAGCGT CAAGTTGGTA ACAAGGTATA TGGTGGTCAA
TCTTCTTACT TCCCTTTGAA GTTAAACATG GCTGGCGTGA TCCCTCCAAT TTTTGCCTCA
TCTATTATTT TGTTCCCTGC AACGATTGCT GGCTGGTTTA CATCCGGCGA GCCAACCAAT
TTGTTTAGCA GAGCAATTAA AGATTTGGCG GCAACTTTGG CTCCAGGCCA GCCTGTGTAC
ACCATTTTGT ATGCCGCTGC GATCATTTTC TTCTGTTTCT TCTATACCGC TTTGGTATTC
AACAGTCGTG AAACTGCTGA AAACCTCAAG AAGAGTGGCG CATTTGTTCC TGGCATTCGT
CCTGGTGATC AAACAGCCCG TTATATCGAT AAGATCTTGG TGCGCTTGAC TTTAGCTGGT
GCAATTTATA TGGTTCTGGT TTGCTTGTTA CCAGAATTCT TAGTCTTGAA GTACAACGTG
CCCTTTTATT TCGGCGGTAC TTCATTGCTA ATTATTGTGG TTGTTGCAAT GGATTTCATG
GCTCAAGTTC AGTCATTTGT CATGCAGCAG CAATACGGCT CTTTGATGAA AAAAGCCAAC
TTTAAGATGG GCGCTTAA
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| Protein sequence | MALAPTNSAS TSTAGGKFGE LRHRLIFLVL ALLVFRLGAH IPVPGIDPDQ LAQLFAGQKD
GILGMFNLFS GGALSRFTVF ALGIMPYISA SIIMQLMTIV VPSLESLKKE GQAGQRKITQ
YTRYGTVFLA TFQALGISVA LQAQPGLVIN PGLTFEVNTV VTLVTGTMFL MWLGEQITER
GLGNGISIII FGGIVSGLPN ALASLLELVR TGSMNIISAL LIVVIVAAVT YFVVFVERGQ
RRILVNYAKR QVGNKVYGGQ SSYFPLKLNM AGVIPPIFAS SIILFPATIA GWFTSGEPTN
LFSRAIKDLA ATLAPGQPVY TILYAAAIIF FCFFYTALVF NSRETAENLK KSGAFVPGIR
PGDQTARYID KILVRLTLAG AIYMVLVCLL PEFLVLKYNV PFYFGGTSLL IIVVVAMDFM
AQVQSFVMQQ QYGSLMKKAN FKMGA
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