Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0048 |
Symbol | rpsL |
ID | 5053681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 56013 |
End bp | 56393 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640470200 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_001154834 |
Protein GI | 145588237 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000042248 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACAA TTAATCAATT AATACGCAAG CCAAGATCCA GGCTTATCGT TAAAAGCAAG AGCCCTGCAC TGGAAAACAG TCCGCAGCGC CGTGGTGTAT GTACACGTGT GTACACAACC ACTCCTAAAA AGCCTAACTC TGCGCTGCGT AAAGTAGCCA AAGTACGCTT AACCAATGGT TTTGAAGTGA TTTCATACAT TGGTGGTGAA GGCCATAACC TCCAGGAACA CTCAGTAGTG TTGATCCGTG GTGGTCGTGT AAAGGATTTG CCAGGTGTTC GTTATCACAT CGTTCGTGGC TCACTTGACT TGCAAGGTGT TAAAGACCGT AAGCAATCAC GTTCCAAGTA CGGTGCTAAG CGCGCTAAGA AAGCTGCTTA A
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Protein sequence | MPTINQLIRK PRSRLIVKSK SPALENSPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG FEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHIVRG SLDLQGVKDR KQSRSKYGAK RAKKAA
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