Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnuc_0041 |
Symbol | |
ID | 5053835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
Kingdom | Bacteria |
Replicon accession | NC_009379 |
Strand | + |
Start bp | 44073 |
End bp | 44645 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640470193 |
Product | NusG antitermination factor |
Protein accession | YP_001154827 |
Protein GI | 145588230 |
COG category | [K] Transcription |
COG ID | [COG0250] Transcription antiterminator |
TIGRFAM ID | [TIGR00922] transcription termination/antitermination factor NusG |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000273158 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGATG CTGAAGCAGC CGTAAATCCA CAAGCAACCG GCAATATGCG CTGGTATGTT ATTCATGCCT ATTCCGGTAT GGAAAAAAGC GTAAAAAAAG GTCTTGAAGA GCGTATTGCA CGTTCTGGCA TGCCCGAAAA GTTTGGTCGT ATCTTGGTTC CATCCGAAGA GGTTGTTGAA ATCAAGTCTG GTGCCAAGTC TGTTACCGAG CGCCGTTTCT TCCCAGGATA CGTCCTGATT GAGATGGAAA TGACGGATGA AAGCTGGCAC TTGGTGAAAA ATACGCCAAA AGTTACTGGT TTCGTTGGTG GCGTGCGTAA CCGCCCAAGC CCAATTTCTA CTGCTGAAGT AGCCAAAATT ATGGATCAAA TGCAGGCCGG GGTTGATAAA CCTAAGCCTA AGACCTTATT TGAGGTTGGC GAGATCGTTC GAGTTAAAGA GGGCCCATTT GTTGATTTCA ACGGAAATAT CGAAGAAGTC AATTATGAGA AGTCAAGATT GCGTGTTTCT GTTACAATCT TTGGCCGCGG TACTCCAGTT GAACTGGAGT TCGGCCAAGT AGAAAAGATG TAA
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Protein sequence | MIDAEAAVNP QATGNMRWYV IHAYSGMEKS VKKGLEERIA RSGMPEKFGR ILVPSEEVVE IKSGAKSVTE RRFFPGYVLI EMEMTDESWH LVKNTPKVTG FVGGVRNRPS PISTAEVAKI MDQMQAGVDK PKPKTLFEVG EIVRVKEGPF VDFNGNIEEV NYEKSRLRVS VTIFGRGTPV ELEFGQVEKM
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