Gene Pnuc_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_0033 
Symbol 
ID5052024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp32491 
End bp32994 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content49% 
IMG OID640470176 
Productcytochrome c, class I 
Protein accessionYP_001154819 
Protein GI145588222 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.198707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACG AGCACGGAAA TCTAATTAAA TCCCCAAAAC AACTCATCAT CATGGTGTTT 
GCAAGCTTTT TTGTGCCCCT GATCATTATT TTGTTGTTAA TGGTGTTTGT GAACAATGGC 
AAGCGTGGCG ATTCTACCGC CGCGACTGAT CAACTAATTA AGCCTGTGGC TCAGTTAAAT 
TTTCAAGGCG CTAGTGCTGG CCCACATGAG CCTCAGACCG GTGAGCAGGT ATACAAAGCC 
GTATGTGCAG CCTGTCACGC TACAGGTGCT GCTGGTGCAC CAAAGTTCGG TGATGCTGCT 
GCATGGGCGC CACGCATTGC TAAGGGTTAC GACTCTTTAT TGACCTCCGT ACTCAAGGGT 
AAAAATGCAA TGCCTGCACG TGGCGGATCT AATCCAGCGG ACATTAGCGA TTACGAATTA 
GGTCGTGCGG TTGTATACAT GGCTAATGCA TCTGGTGGTA AGTTGCCAGA GCCGAAAGCG 
CCTGATGCAG CAGCTGCAAA ATAA
 
Protein sequence
MSNEHGNLIK SPKQLIIMVF ASFFVPLIII LLLMVFVNNG KRGDSTAATD QLIKPVAQLN 
FQGASAGPHE PQTGEQVYKA VCAACHATGA AGAPKFGDAA AWAPRIAKGY DSLLTSVLKG 
KNAMPARGGS NPADISDYEL GRAVVYMANA SGGKLPEPKA PDAAAAK