| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnuc_0011 |
|---|
| Symbol | |
|---|
| ID | 5052483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009379 |
|---|
| Strand | - |
|---|
| Start bp | 10721 |
|---|
| End bp | 11734 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640470153 |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_001154797 |
|---|
| Protein GI | 145588200 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.477677 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTCCG AAACCGTCGT TTTTCAAGAG CAGCTTTCTA ACTATCTCAA GGATATTGGA
CTGACAGATG GTCCTATAGG GCTTAGCCAA CTGACTGGCG GACAATCAAA CCCTACTTAT
AAAATCAGTA GTGGCAGCAA GCATTACGTT CTCAGAAAAA AACCGGGGGG CGTCTTATTG
CCTTCAGCCC ACGCAGTAGA CAGAGAATAT CGAGTAATGA AGGCTCTCGC CAACACTAAT
GTTCCAGTAC CCCAAATGCT TGCTTACTGC GAGGATGAAA GCATCATCGG TACGGCGTTT
TTCGTGATGG AATATTTAGA TGGTCGTGTT TTTATTGACC AGTCACTTAC GCAACTCCAG
GCAACTGAAC GCCATACGCT TTACGAAGAA ATGAATCGCA CTATCGCTGC AATTCATAAA
CTTGACTATG TTGCGCTTGG ATTGGAAAGT TTTGGAAAAC CAGGAAATTA CTTTTCAAGG
CAAATTGCCC GTTGGTCAAG GCAAGTGCGT GATGCCAACA TTCCCATACC TGACTCATTA
AATAAACTAA TGGATTGGTT GCCAGAAAAT ATTCCTAATG AAGACGAAAC CTCTCTAATC
CACGGCGATT TTCGTATGGA TAACTTGATT TTTCATAAAA CTGAATTACG CGTTATCGGG
GTATTGGATT GGGAGCTTTC AACCTTAGGC AATCCATTGG CTGATTTTGC CTATCAATGC
ATGGCCTGGA GGATAGCCCC CACCTTGTGG CGCGGAATAC AGGGCTTAGA TTTAAAAAGT
CTTGGGATTC CAAGCGAGGC TGAATATATC GCCATGTATG AAAAGCGGAT AGGTCGGCCA
ATAGCCGAAC ACTGGCCCTT CCTTATGGCT TACAACCTCT TCCGAATTTC AGCCATTTTG
CACGGCATTA CCAAACGGGC AATGGATGGC AATGCCAATG CCAGTGACGC GATCGAGAAT
GGTAAAAAGG CCGGGGCACT TGCCGATTTA GGTTGGGCTT GCGCGCAACA ATAA
|
|---|
| Protein sequence | MSSETVVFQE QLSNYLKDIG LTDGPIGLSQ LTGGQSNPTY KISSGSKHYV LRKKPGGVLL
PSAHAVDREY RVMKALANTN VPVPQMLAYC EDESIIGTAF FVMEYLDGRV FIDQSLTQLQ
ATERHTLYEE MNRTIAAIHK LDYVALGLES FGKPGNYFSR QIARWSRQVR DANIPIPDSL
NKLMDWLPEN IPNEDETSLI HGDFRMDNLI FHKTELRVIG VLDWELSTLG NPLADFAYQC
MAWRIAPTLW RGIQGLDLKS LGIPSEAEYI AMYEKRIGRP IAEHWPFLMA YNLFRISAIL
HGITKRAMDG NANASDAIEN GKKAGALADL GWACAQQ
|
|---|
| |