| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_R0005 |
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| Symbol | |
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| ID | 6184075 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 35994 |
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| End bp | 38804 |
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| Gene Length | 2811 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 50% |
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| IMG OID | 641670771 |
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| Product | 23S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000415138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.00000000363122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GATCAAGTGA ATAAGTGCAC ATGATGGATG CCTTGGCGAT TACAGGCGAC GAAGGACGTT
ATAACCTGCG ATAAGCCTCG GGGAGCTGGT AAATAAGCTT TGATCCGGGG ATTTCTGAAT
GGGGAAACCC ACCACTTTTG TGGTATCCAT ACCTGAATAC ATAGGGTATG TGAAGCGAAC
CTCGTGAACT GAAACATCTA AGTAGCGAGA GGAAAAGACA TCAACCGAGA TTCCCAAAGT
AGTGGCGAGC GAAATGGGAA GAGCCTTCTA GTGATAACTC AGTAATTAAC AGAATGGAAT
GGAAAGTCCA ACAATAAAGG GTGATAGTCC CGTATGTGAA AATTATTGGG TGGTACTAGG
CTAGAGACAA GTAGGGCGGG ACACGTGAAA TCCTGTCTGA ATATGGGGGG ACCATCCTCC
AAGGCTAAAT ACTCGTAATC GACCGATAGT GAACAAGTAC CGTGAGGGAA AGGCGAAAAG
AACCCCGGGA GGGGAGTGAA ATAGATCCTG AAATTGTGTG CATACAAACA GTAGGAGCCT
CGTAAGGGGT GACTGCGTAC CTTTTGTATA ATGGGTCAGC GACTTACATT CAGTAGCAAG
CTTAACCAAA TAGGGAAGGC GTAGCGAAAG CGAGTCCGAA TAGGGCGCTA GTTGCTGGGT
GTAGACCCGA AACCAGTTGA TCTATCCATG GCCAGGTTGA AGGTGCGGTA ACGCGTACTG
GAGGACCGAA CCCACTAACG TTGAAAAGTT AGGGGATGAG CTGTGGATAG GGGTGAAAGG
CTAAACAAAA CTGGAAATAG CTGGTTCTCT CCGAAAACTA TTTAGGTAGT GCCTCGTGTA
TCACTGTAGG GGGTAGAGCA CTGTCATGGT AGTGGGGTCC ATTGCGGATT ACTGCACCAT
AGCAAACTCC GAATACCTAC AAGTGCGAGC ACGGGAGACA GACATCGGGT GCTAACGTCC
GGTGTCAAGA GGGAAACAAC CCAGACCGCC AGCTAAGGTC CCTAATATAT GCTAAGTGGG
AAACGAAGTG GGAAGGCTAA AACAGTCAGG AGGTTGGCTT AGAAGCAGCC ATCCTTTAAA
GAAAGCGTAA TAGCTCACTG ATCGAGTCGT CTTGCGCGGA AGATGTAACG GGGCTAAGCA
TGTAACCGAA GCTGCGGATC ACGTAAGTGA TGGTAGGAGA GCGTTCTGTA AGCCTGTGAA
GGTGTCTTGT AAAGGATGCT GGAGGTATCA GAAGTGCGAA TGCTGACATG AGTAGCGATA
AAGGGGGTGA AAAGCCCCCT CGCCGTAAGC CCAAGGTTTC CTGTTCAACG TTCATCGGAA
CAGGGTGAGT CGGCCCCTAA GGCGAGGCAG AGATGCGTAG CCGATGGGAA CAAGGTTAAT
ATTCCTTGAC CATTGTTAGA TGCGATGGGG GGACGGATCG CGGAAAGTTG TCCGGGTGTT
GGATGTCCCG GTTCTTGCGT TGGAGATGGC TATTAGGTAA ATCCGGTAGC GTAATTCAAG
GACGTGAGAC GAGCGAATTT ATTCGCGAAG CAATTGGAAG TGGTTCCAAG AAAAGCCTCT
AAGCTTCAGT CTAACAAGAC CGTACCGCAA ACCGACACAG GTGGGCGAGA TGAGTATTCT
AAGGCGCTTG AGAGAACTCA GGAGAAGGAA CTCGGCAAAT TTGCACCGTA ACTTCGGGAT
AAGGTGCGCC TTTGTAGTTT GACCATGAAC GATGGAAGGA CGAAAGGGTT GCAATAAAAA
GGTGGCTGCG ACTGTTTAAT AAAAACACAG CACTCTGCAA ACACAAAAGT GGACGTATAG
GGTGTGACGC CTGCCCGGTG CTGGAAGATT AAATGATGGG GTGCAAGCTC TTGATTGAAG
TCCCAGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT
AAGTTCCGAC CTGCACGAAT GGCGTAACGA TGGCCACACT GTCTCCTCCT GAGACTCAGC
GAAGTTGAAA TGTTTGTGAT GATGCAATCT ACCCGTGGCT AGACGGAAAG ACCCCATGAA
CCTTTACTGT AGCTTTGCAT TGGACTTTGA ATCGGTCTGT GTAGGATAGG TGGGAGGCGT
TGATAACAGG ATGCTAGTTC TGTTGGAGCC AACCTTGAAA TACCACCCTG ATTTATTTGA
GGTTCTAACC TTGGCCCGTT ATCCGGGTCG GGAACAGTGC ATGGTAGGCA GTTTGACTGG
GGCGGTCTCC TCCCAAAGTG TAACGGAGGA GTACGAAGGT ACGCTTGGTA CGGTCGGACA
TCGTACCTAA AGTGCAATGG CAAAAGCGTG CTTAACTGCG AGACCGACAA GTCGAGCAGG
TGCGAAAGCA GGTCATAGTG ATCCGGTGGT TCTGTATGGA AGGGCCATCG CTCAACGGAT
AAAAGGTACT CTGGGGATAA CAGGCTAATA CCGCCCAAGA GTTCATATCG ACGGCGGTGT
TTGGCACCTC GATGTCGGCT CATCTCATCC TGGGGCTGTA GCCGGTCCCA AGGGTATGGC
TGTTCGCCAT TTAAAGAGGT ACGTGAGCTG GGTTTAAAAC GTCGTGAGAC AGTTTGGTCC
CTATCTGCCA TGGGCGTTGG AGATTTGACG GGGGCTGCTC CTAGTACGAG AGGACCGGAG
TGGACGTACC GCTGGTGTAC CTGTTGTTTC GCCAGAAGCA TCGCAGGGTA GCTATGTACG
GAAGAGATAA CCGCTGAAAG CATCTAAGCG GGAAACTTGC CTGAAGATGA GATCTCCCGT
AGATTTAACC TACATAAAGG GTCGTTGAAG ACCACAACGT TGATAGGTCG G
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| Protein sequence | |
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