| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1775 |
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| Symbol | |
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| ID | 6182962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1546276 |
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| End bp | 1547529 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641672273 |
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| Product | Fmu (Sun) domain protein |
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| Protein accession | YP_001798442 |
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| Protein GI | 171464329 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGATC AAAAAACACT ACGTAGTCTC CCGCTCTCTG AAGCAATCAC GATTGCTGCT
CAAGCGATTA GCGAGGTAAT GGACGGAAGA TCGCTCACAG AAGTTTTGGA TCAGTTGGAT
GCTCATGAGC GCCCGATTGT TCAAAGCTTA AGTTTTGATG CACTCCGTAA ATGGGTTCGT
TCTCACGAAC TCATCAAGCA ATTTGCTCCA AAAACTCCGC CGCGAGAGGT CGATCATTTG
TTAAGCGTTG GAATTGCTTT ATTTTTACAA AATGAAGCAG GCGGCAAATC TTATCCAGCG
TACACTATTG TTGATCAGGC CGTAAAAGCA TGTGGCGAAT ATGACAAAAC GATGTATGCC
AAGGGGCTGG TTAACGCGGT TTTGCGCAAG GTCAGCTTGA TGGTGCAGCC GCCCGAGGGC
GAGAAACGTT ACACGCCTGA CCCCATTCCG ATGTATGGGC CTGCTTGGTG GCGCGCAAAT
ATTAAGCGTA ATTATTCTAA GCAGTGGCAA TCGATTTTGT TTCAGCAGGC CAAGCGTGCA
CCATTAATTT TGCGTGTATA CCAAAAGCAA TATGCTCGCG AGCAATATCA AGCTCTCTTA
GCGGAGGCTG GAATTTCCTC AAAACCAATA GCTGAAGTGG CGGGCGTTCG GCGGTCTTTC
GCGCTCTTAT TACCAGAAGC CGTGCCTGTA TCCGATCCAC CTGGTTTTTA TAGCAGCGCG
GTATCCGTGC AAGATGCTGG CGCACAACTG GCTGCGGTTT TATTAAACCC CCAGGATGGA
GAGTTGGTAT TGGATGCTTG CGCTGCTCCT GGTGGAAAAA CCGCGCACTT ATTAAAACTT
GCAGACTGTT CAATGCGGGC CTTGGAGTTG GATGGTGAGC GCATCGGAAA AATTGGCGGT
AATTTAGATC GTCTGCGCCT GCATTCTGAC AAGGTGCGTG TGCTGCGCGG CGATGCGTCT
AAAGCTGCAT GGTGGGATGG CACCCCTTTT GACAAAATTT TGCTTGATGC ACCTTGTTCT
GTTTCTGGGA TTGTGGCACG ACATCCAGAC ATTCCATTTT TAAGGCGCGA AGCTGATGTA
AGGGCTCTAC AGGAAAGACA GCGTGCCATC TTGAATCAGG CGTGGAAGAT GCTCAAGTCA
GGGGGCGCTC TTTTATACGT TACTTGCTCG ATATTTGTTG AAGAAGGCGA GGACAAGGCC
AATTGGTTTA CTGAGCAGCA CCCCAATGCG GTACGATTAG ACGCTCCGGG GTAG
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| Protein sequence | MTDQKTLRSL PLSEAITIAA QAISEVMDGR SLTEVLDQLD AHERPIVQSL SFDALRKWVR
SHELIKQFAP KTPPREVDHL LSVGIALFLQ NEAGGKSYPA YTIVDQAVKA CGEYDKTMYA
KGLVNAVLRK VSLMVQPPEG EKRYTPDPIP MYGPAWWRAN IKRNYSKQWQ SILFQQAKRA
PLILRVYQKQ YAREQYQALL AEAGISSKPI AEVAGVRRSF ALLLPEAVPV SDPPGFYSSA
VSVQDAGAQL AAVLLNPQDG ELVLDACAAP GGKTAHLLKL ADCSMRALEL DGERIGKIGG
NLDRLRLHSD KVRVLRGDAS KAAWWDGTPF DKILLDAPCS VSGIVARHPD IPFLRREADV
RALQERQRAI LNQAWKMLKS GGALLYVTCS IFVEEGEDKA NWFTEQHPNA VRLDAPG
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