Gene Pnec_1738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1738 
Symbol 
ID6183717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1521305 
End bp1522348 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content49% 
IMG OID641672241 
Productrod shape-determining protein MreB 
Protein accessionYP_001798411 
Protein GI171464298 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.863773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGGTT TTTTCCGCAG CTACTTTTCC AATGACCTAG CCATCGACCT AGGAACCGCC 
AACACCTTAA TTTATATGCG TGAGCGGGGT ATTGTCCTCG ATGAACCATC GGTTGTGGCA
ATTCGCCAAG AAGGTGGCCC AAACGGCAAA AAGACTATTT TGGCCGTTGG CAAAGAGGCA
AAAGCGATGT TGGGACGCGT TCCAGGGAAT ATTGAGGCAA TTCGCCCAAT GAAAGACGGC
GTTATTGCCG ACTTCACCAT TACCGAACAA ATGCTCAAGC AATTTATCAA GCTTGTGCAC
GAAAGCAAAT TATTAAAGCC AAGTCCACGC ATCATCATTT GCGTTCCATG TGGATCCACA
CAAGTTGAGC GTCGGGCGAT TCGTGAATCA GCATTAGGCG CTGGTGCATC ACAAGTATTT
TTAATTGACG AACCAATGGC CGCTGCAATT GGTTCTGGCT TACCAGTTTC TGAAGCTGCT
GGCTCGATGG TTGTCGACAT CGGTGGCGGC ACAACTGAGG TCGGCGTGAT GTCATTAGGT
GGTATGGTTT ACAAAGGCTC TGTTCGTGTT GGCGGCGACA AGTTTGATGA AGCGATTACA
AATTATATCC GCCGCAATTA CGGCATGTTG ATCGGCGAAC AAACTGCTGA GTTAATCAAG
AAAACGATTG GCTCTGCTTT CCCTGGCGCT GAAGTACGCG AGATGGAAGT GAAAGGTCGC
AATCTTTCTG AAGGCATTCC ACGTAGCTTC ACCGTTACAA GCAATGAAAT TCTCGAGGCC
TTAACTGATC CGCTCAACCA AATCGTGACA GCAGTAAAAG CAGCGCTCGA GCAAATTCCA
CCCGAGTTGG CGTCTGATAT TGCCGAGCGC GGCATGATGC TTACAGGCGG CGGCGCCTTG
TTGCGTGACC TTGATCGTCT CTTGCTTGAA GAGACTGGTT TACCGATTCA TGTCGCAGAA
GATCCTTTAA CTTGCGTGGC TCGTGGTTGC GGTATCGCAC TTGAGCGCAT GGATAAGTTA
GGCGGAGTGT TCTCGCACGA GTAA
 
Protein sequence
MFGFFRSYFS NDLAIDLGTA NTLIYMRERG IVLDEPSVVA IRQEGGPNGK KTILAVGKEA 
KAMLGRVPGN IEAIRPMKDG VIADFTITEQ MLKQFIKLVH ESKLLKPSPR IIICVPCGST
QVERRAIRES ALGAGASQVF LIDEPMAAAI GSGLPVSEAA GSMVVDIGGG TTEVGVMSLG
GMVYKGSVRV GGDKFDEAIT NYIRRNYGML IGEQTAELIK KTIGSAFPGA EVREMEVKGR
NLSEGIPRSF TVTSNEILEA LTDPLNQIVT AVKAALEQIP PELASDIAER GMMLTGGGAL
LRDLDRLLLE ETGLPIHVAE DPLTCVARGC GIALERMDKL GGVFSHE