| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1736 |
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| Symbol | gatA |
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| ID | 6183651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1519436 |
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| End bp | 1520953 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672239 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_001798409 |
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| Protein GI | 171464296 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 82 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTGGC ATAACACCCC CATTGCCTTA ATGGCAAAAG CACTAGCCGC AAAAGAGGTT
TCTAGTGTTG AGTTAACCCA GTACTTTTTA GATCGTATTG AGGCTGGAAG AAGGTGGAAT
GCCTACCTTG ATGTGAATAC TCACTTAAGT TTAAAGCAAG CAAATAAGGC AGATCAGTTA
ATCTCATCCG GAAAGTCTGG CAAATTAACG GGCATCCCTG TGGCTCATAA GGATGTCTTT
GTAACGCGGG GCTGGAAGTC AACGGCAGCC TCCAAAATCT TAGCTGGATA CCAAAGCCCC
TTTGATGCCA CAGTAGTCGC CAATCTGGGA ATTCCTGACG AAATTAATCC CCATGGTGCT
GGTATGGTTT GCCTGGGCAA AACCAATATG GACGAGTTTG CGATGGGCTC TTCTAATGAA
AACTCTGCTT TTGGACTAGT CTTAAATCCT TGGAATGCTG CTCACGTAGC GGGTGGCTCA
TCTGGTGGTT CAGCTGCAGC AGTAGCTGCT GGCCTGGCTC CGATAGCCAC TGGTACCGAT
ACTGGAGGCT CGATTCGTCA GCCAGCTGCA TTTTGTGGCT TAACCGGAAT TAAGCCGAGC
TATGGGCGCG TCTCACGTTA CGGCATGATC GCTTACGCAT CTTCTCTCGA TCAAGCAGGC
CCAATGGGCA AAACTGCTGA AGATTGCGCG CTGCTTCTTT CAGTAATGTC TTCATATGAT
CCACGAGATT CCACTTCTTT AGCTGATTCG GGGGAAGACT ATGGTCGTTA CCTCAATCAA
GATTGGAAAG AAGGTAATGC GAATTCTGCG AAGCCATTGG AAGGCTTGCG CGTTAGCTTG
CCAAAAGAAT TCTTTGCTGA AGGTTTGGCA AATGATGTTG CGAAATCCGT AAATGAAGCA
GCGAAGCTTT TAGAAAATTT AGGCGCCACC TTGGTGGAAG TCAGCTTGCC AAAAACCAAA
TTATCAATCT CAGTGTATTA CGTTTTGGCA CCGGCAGAAG CATCGAGCAA TTTGAGCCGC
TTTGATGGCG TGCGTTACGG TTATCGCGCA AATGACTATT GCGATTTTGG CGACATGTAT
GCCAAGTCCC GCACTGAAGG TTTTGGTTCT GAAGTGAAGC GTCGTATCAT GATTGGTACA
TATGTTCTTT GTCACGGCTA TTACGATGCC TACTATCTGC AAGCGCAAAA GATTCGTCGC
ATCATTGCAG CGGATTTTCA GACTGCATTT AATCAATGCG ATGTCATCTT GGGGCCTGTG
GCTCCTGATG TGGCTTGGCG TTTAGGTGAA AAATCAAAAG ACCCGGTGCA AATGTATCTC
GAAGATATTT ACACACTTTC TACCAACTTA GCGGGCCTAC CAGCGATGAG TGTTCCATGT
GGATTTAGTG GAAATAATTT ACCTATTGGT ATGCAACTCA TCGGCAACTA TTTTTCAGAA
GCACGCTTGT TGCAGGTGGC CCATCGATAC CAGCAGGCCA GTGACTGGCA TTTGCGAACA
GCAGGTGAGG TGGCATGA
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| Protein sequence | MSWHNTPIAL MAKALAAKEV SSVELTQYFL DRIEAGRRWN AYLDVNTHLS LKQANKADQL
ISSGKSGKLT GIPVAHKDVF VTRGWKSTAA SKILAGYQSP FDATVVANLG IPDEINPHGA
GMVCLGKTNM DEFAMGSSNE NSAFGLVLNP WNAAHVAGGS SGGSAAAVAA GLAPIATGTD
TGGSIRQPAA FCGLTGIKPS YGRVSRYGMI AYASSLDQAG PMGKTAEDCA LLLSVMSSYD
PRDSTSLADS GEDYGRYLNQ DWKEGNANSA KPLEGLRVSL PKEFFAEGLA NDVAKSVNEA
AKLLENLGAT LVEVSLPKTK LSISVYYVLA PAEASSNLSR FDGVRYGYRA NDYCDFGDMY
AKSRTEGFGS EVKRRIMIGT YVLCHGYYDA YYLQAQKIRR IIAADFQTAF NQCDVILGPV
APDVAWRLGE KSKDPVQMYL EDIYTLSTNL AGLPAMSVPC GFSGNNLPIG MQLIGNYFSE
ARLLQVAHRY QQASDWHLRT AGEVA
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