| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1735 |
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| Symbol | gatB |
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| ID | 6183243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1517967 |
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| End bp | 1519439 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672238 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_001798408 |
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| Protein GI | 171464295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.94386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 80 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCAAT GGGAAGTTGT TATTGGTCTA GAGACCCACG CACAATTACA AACGCAATCG
AAGATTTTTA GCGGCGCCAG TACACGCTTT GGCGCAGCGC CAAATACTCA AGCCTGTGCA
GTTGATCTTG CATTGCCTGG CGTACTGCCA GTACTCAATC GTCAAGCAGT AGAGCATGCA
ATTCGCTTTG GGTTGGCGGT GAATGCGAAA ATTTCACCAG CCAGTATTTT TGCGCGTAAG
AACTATTTTT ACCCCGACCT TCCCAAGGGC TATCAAATCA GCCAAATGGA GATTCCGGTA
GTGATTGCCG GCCAAGTTGA AATTTTGGTT GGCGATGAGG TGAAGGTAGT TCAGCTCACT
CGCGCCCATA TGGAAGAGGA TGCTGGTAAA TCAGTCCACG AGGAGGGTTT TATTGGCCCT
CATGGCGAGC CCTCTAGCGG TATTGATTTA AACCGTGCAG GCACACCCTT GTTGGAAATC
GTGACTGAGC CGGTCATGCG AAGCGCAGCC GAGGCGGTTG CCTATGCCAA AGCCCTGCAT
GGCTTGGTTG TTTGGTTGGG GGTTTGTGAC GGCAATATGC AAGAAGGCTC TTTCCGTTGC
GATGTGAACG TTTCTGTTCG TCCCAAGGGG CAAGCTGAAT TTGGTACTCG TTGTGAAATT
AAAAACTTGA ACTCCTTCCG CTTTTTAGAA GAGGCAATTC AATATGAAGT GCGTCGTCAA
ATTGAGCTAA TTGAAGATGG TGGCGCCGTC GTTCAAGAAA CGCGTTTGTA CGACCCCGAT
CGTGGTGAAA CTCGCAGCAT GCGCAGTAAA GAAGATGCTA ATGACTACCG TTATTTCCCG
GACCCAGATT TATTGCCAGT GGTGATTGAT GATGCATGGA TTGCTGATGT GCGTAGCAAG
ATGCCCGCAT TACCTGCACA GCTGCGTGAT CAGTGGCAAA GCGAATTTGG TTTAAGTGCT
TACGATGCGC AGTTGTTAAC TCAAGATCAC GACACAGCAA AAATATTTGA AGAGTTGTTG
GTAATTGTTG GTAAGCCATT GGCTAAAGCG GCTGCTAATT TAATTGCCGG TGAATTTGCT
TCGTCTTTAA ATCGCGCTGG CATTGCAATG GCTGACGCAC CATTAAAAGC GGAGCATTTA
GCGCCTTTGC TCACTCGTGT TGCAGATGGC ACTATTTCCA ACAAAATTGC TAAAGACATC
TTTGTGATTC TTTGGGAAGA GGCTATTGCT GGTGGGACTA TCAGTACGGT TGATCAAGTG
ATTGATGTCA AGGGCTTAAA GCAAATTAGT GATAGCGGGG CAATCGAGGC CATCATTGAC
CAAGTATTGG CGGCCAATCA AAAATCTGTT GAAGAGTTCC GCTCTGGCAA AGAGAAGGCC
TTCAATGCTT TGGTTGGTCA GATTATGAAG GCCTCACAAG GCAAGGCCAA TCCCGGTCAG
GTAAATGAAC TCTTGCGCAA AAAGCTTGGT TAA
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| Protein sequence | MMQWEVVIGL ETHAQLQTQS KIFSGASTRF GAAPNTQACA VDLALPGVLP VLNRQAVEHA
IRFGLAVNAK ISPASIFARK NYFYPDLPKG YQISQMEIPV VIAGQVEILV GDEVKVVQLT
RAHMEEDAGK SVHEEGFIGP HGEPSSGIDL NRAGTPLLEI VTEPVMRSAA EAVAYAKALH
GLVVWLGVCD GNMQEGSFRC DVNVSVRPKG QAEFGTRCEI KNLNSFRFLE EAIQYEVRRQ
IELIEDGGAV VQETRLYDPD RGETRSMRSK EDANDYRYFP DPDLLPVVID DAWIADVRSK
MPALPAQLRD QWQSEFGLSA YDAQLLTQDH DTAKIFEELL VIVGKPLAKA AANLIAGEFA
SSLNRAGIAM ADAPLKAEHL APLLTRVADG TISNKIAKDI FVILWEEAIA GGTISTVDQV
IDVKGLKQIS DSGAIEAIID QVLAANQKSV EEFRSGKEKA FNALVGQIMK ASQGKANPGQ
VNELLRKKLG
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