| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1649 |
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| Symbol | gpsA |
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| ID | 6183723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1447461 |
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| End bp | 1448483 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641672167 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001798337 |
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| Protein GI | 171464224 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.22983 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 0.847204 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGTGA CACTGCTTGG TGCTGGTGCT TGGGGTATGG CGATGGCTGC GCAAGCGACT
CGCCACCTCC AAGAGGGCGA TGTGTGCTTG TGGTCTCGAA GCAAAGAGCA ATTATTAGAT
ATTCAAGAGA GCGGTGAAAA TCGCGCTTAT CTTTCGGGTA TTAAATTGCC GGAGGGATTA
AAGCTAGAAG GTGATTTCTC TGCAGCAGTC AAAAGACTTT CTATTGATGA TCTATTGGTT
ATTGCAACAC CGATGTCAGG ACTATCAGAA ACGATTGCTC AAGTCCTGAG GGTTGCTGAA
CATCCTCTCA ATATTATTTG GTTATGCAAA GGCCTCGAGC CGAATACTGC TTTATTGCCT
CATCAGGTTG TAGAGCGCGA AAGCAAAATT CATTCACATG GCATCACACA TTCTTATGGC
GCTTTATCGG GCCCAAGTTT TGCTCGTGAA GTTGGCGTTG GAATGCCTTG CGCCTTAACA
GTCGCTAGTA AATCCCCTAA GCTTTGTGAA GTAGTCCAAG CAGCTTTCCA TCACGGCAAT
ATGCGTGTTT ATTCAAGTGA TGATTTGATT GGTGTTGAAT TGGGTGGCGC TATTAAGAAT
GTGTTGGCCA TTGCAGCAGG AATTGGCGAT GGCTTAGATT TAGGTCTTAA CGCGCGGGCT
GCAGTTCTTA CCCGAGGTTT GGCAGAGATG ATGCGCCTGG TAAAAGCAGC AGGCGGTAAA
TCGGAGACTT GTATGGGTTT AACTGGAGTG GGGGATTTGA TCTTGACCGC TACCGGTGAT
TTATCGCGTA ACCGTAGGGT AGGCCTGGAG CTGGCTGCTG GTAAGTCATT ACCAGAAATA
CTTGCTAGTC TTGGCCATGT TGCTGAGGGC GTGCTTTGTG CCCAAGCAGT TGGTGATCTG
GCTAAACGCT TGGGCATTGA AATGCCAATT ACCGCCATGA TGGATGAAGT GCTATCTGGA
AAACTCAAGC CACATGACGC TGTTAAAAAG CTCATGGGGC GCGATCCAAA AATTGAATCG
TAA
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| Protein sequence | MKVTLLGAGA WGMAMAAQAT RHLQEGDVCL WSRSKEQLLD IQESGENRAY LSGIKLPEGL
KLEGDFSAAV KRLSIDDLLV IATPMSGLSE TIAQVLRVAE HPLNIIWLCK GLEPNTALLP
HQVVERESKI HSHGITHSYG ALSGPSFARE VGVGMPCALT VASKSPKLCE VVQAAFHHGN
MRVYSSDDLI GVELGGAIKN VLAIAAGIGD GLDLGLNARA AVLTRGLAEM MRLVKAAGGK
SETCMGLTGV GDLILTATGD LSRNRRVGLE LAAGKSLPEI LASLGHVAEG VLCAQAVGDL
AKRLGIEMPI TAMMDEVLSG KLKPHDAVKK LMGRDPKIES
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