Gene Pnec_1642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1642 
Symbol 
ID6183570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1441499 
End bp1441696 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content41% 
IMG OID641672160 
Productputative transmembrane protein 
Protein accessionYP_001798330 
Protein GI171464217 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.115403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value0.943321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA AAAAAAGTAG TTTTATACAG TCTATGAAAG CCGTGATGTG GGGCTTTTTG 
GGGGTGCGTA AAAAAGCAGG TTTGCAGGAA GATGTTGCTT CATTGAGTTT TGTGCACATT 
ATCATTGCAG GTGTTGTCGG TGCCTTGATT TTTATGGGCG TTCTCCTGTT GATAGTGAAA 
GCAGTTGTGT CCCATTGA
 
Protein sequence
MKKKKSSFIQ SMKAVMWGFL GVRKKAGLQE DVASLSFVHI IIAGVVGALI FMGVLLLIVK 
AVVSH