| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1610 |
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| Symbol | |
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| ID | 6183967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1411834 |
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| End bp | 1414731 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641672127 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001798298 |
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| Protein GI | 171464185 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 66 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACG AAATCAAGAT CCGCGGTGCC CGCACCCACA ACCTCAAAAA CATCAATCTA
GACATTCCTA GAGAGAAATT AGTCGTCCTT ACCGGCTTAT CTGGATCAGG CAAAAGCTCA
TTAGCGTTCG ACACTCTCTA TGCAGAGGGC CAGCGCCGCT ATGTTGAGTC TCTTTCAGCC
TATGCCCGTC AGTTTTTACA ACTTATGGAA AAACCAGACG TTGACACTAT TGAAGGGTTA
TCGCCAGCGA TTTCGATTGA ACAAAAAGCA ACGAGTCATA ACCCGCGATC AACTGTTGGT
ACCGTTACTG AAATTCATGA CTACTTACGT TTGTTGTTTG CACGCGCCGG TACGCCGCAT
TGCCCCGATC ACGACCTGCC GCTAGAAGCG CAAAGTGTTT CACAAATGGT CGATACCGTG
TTGTCGATGC CAGAAGATAC TAAGTTAATG GTTCTGGCTC CAGTAGTGAG TGAGCGCAAA
GGCGAATTCG TTGACCTCTT TCAAGACCTA CAGGCACAAG GCTTTGTGCG CTTTCGAGTG
CGCTCTGGTG GCGGCACAGC AAACGCCGCC AAGGCAGAAA TCTTTGAAGT GGATCAGCTG
CCCACTCTAA AGAAAAACGA TAAGCACTCT ATTGAAATGG TTGTTGATCG AATTAAGGTG
CGCCCAGATA TTCAGCAGCG TTTAGCGGAA TCTTTTGAAA CAGCCTTACG CTTGGCTGAT
GGCAAAGCCA TGATTGTGGA TATGGACACT GGCAAAGAAA TGATTTTCTC CAGTAAGTTC
GCTTGTCCTG TTTGCTCATA CTCATTACAA GAATTGGAGC CTCGCCTCTT CTCCTTCAAT
AACCCCATGG GCGCTTGCCC ATCATGCGAT GGCCTGGGAC ATCAGTCTTT CTTTGACCCA
AAGCGTATCG TTGCACATCC AGATTTATCA CTGGCATCAG GGGCAATTAA AGGCTGGGAT
CGTCGCAATC AGTTTTACTT CAAACTGCTT CAGACGCTTG CCAAGCACGG TGGCTTCGAT
GTTGAAAAGC CATTTGAAAC ACTATCCAAA AAACAGCAAG ATCTCATTCT CTTGGGTTCT
GGTGATGTCA CCATTCCTTT TGAATACATC AACGAGCGCG GCAAAAACAG TATTCGCGAG
CATGCTTTTG AAGGCATTGT TGCCAACTTT GAGAGACGTT ATCGTGAAAC TGATTCGATG
ACAGTTCGCG AAGAATTATC ACGCTATCAA AATGTTCAAA CTTGCCCGGG ATGTAATGGC
AGTCGTTTAC GAAAAGAAGC TCGCTTTGTC GAAGTGGGTG AGAAAAAACA GTCGCGTGCA
ATTTATGAAA TCAGTGCTTT GCCCCTGAAA GAAGCTAAAG AGTATTTTGA AACACTCGAA
CTCAAAGGTG CGAAAAGAGA AATCGCAGAC AAGATTGTTA AAGAGATCAG TGCACGCCTA
CGCTTCTTAA ACGACGTGGG CCTTGATTAC CTATCGCTCG AGCGTAGTGC TGACACCCTT
TCAGGCGGTG AAGCCCAACG AATTCATCTG GCAAGTCAGA TTGGCTCCGG CTTAACTGGC
GTGATGTATG TCCTGGATGA ACCGTCGATT GGTCTGCACC AACGCGATAA CGATCGTTTG
ATTGGAACCC TGAAACACTT ACGTGATTTA GGTAATAGCG TCTTGGTAGT TGAGCATGAT
GAAGACATGA TCCGCGCATC TGACTGGGTA ATTGATATTG GCCCTGGTGC CGGTGTCCAT
GGTGGCGAAG TGGTTGCTCA AGGTACGCCT ACAGAAATTG AAGCAAACCC GAACTCCTTA
ACTGGCGCCT ACCTTGCTGG CCGTGAAGTC ATTGCAGTTC CAGACAAACG CATCCCAGTA
AATGAGCGCT TCTTGGAGAT CATTGGTGCG CGTGGCAATA ACCTGCAATC TGTACACGCC
AAGATTCCAG TTGGACTTCT GACCTGCGTT ACCGGTGTAT CAGGCTCAGG TAAGTCGACC
TTAATTAACG ACACCCTGCA TCATGCAGTT GCACAACATC TGTATGGCTC GAATGCTGAG
CCTGCAGCAC ACGATGCAAT CAAGGGTCTG GAGCATTTCG ATAAGGTGAT TAGTGTTGAC
CAATCTCCGA TTGGTAGAAC TCCACGCTCT AACCCCGCAA CCTATACCGG TCTTTTCACT
CCGATTAGAG AACTCTTTGC TGGTGTTCCT GCATCACGCG AACGAGGCTA TGAAGCTGGC
CGCTTCTCTT TTAACGTTAA AGGCGGTCGC TGTGATTCTT GTGAAGGTGA TGGCGTTCTC
AAAGTAGAGA TGCATTTCTT GCCAGACGTG TATGTGCCTT GCGATGTTTG TCATGGCAAG
CGCTATAACC GCGAAACTTT AGATATTCGT TACAAGGGTA AAAATATTCA TGAAGTGCTA
TCGATGACCA TCGAACAAGC CCATGAATTC TTTGAAGCGA TTCCGGTCGT AAAGCGCAAA
CTCAAAACAC TCCTTGACGT TGGCTTGGGT TACGTAAAAC TGGGGCAAAG CGCAACCACC
CTTTCAGGCG GCGAAGCGCA ACGCGTCAAA CTCTCGCTGG AACTCTCAAA ACGCGACACT
GGCAGAACCT TATACATCCT TGATGAGCCA ACCACTGGCC TGCATTTCCA TGACATTCAG
TTGTTGCTAA CTGTCATTCA AACGCTCAAG AAACAAGGCA ATACGATTGT CATCATTGAG
CACAATCTCG ATGTCATTAA GACGGCTGAT TGGATTATTG ACTTGGGGCC TAAAGGTGGA
GCGGGCGGCG GACAGATCAT TGCCACTGGC ACACCAGAAG ATGTGGCCAA TAATGAAGTG
AGTTTTACAG GTCACTACTT AGCGCCCTTG CTAACTCGTA AGAGTCCTAC TCCGGCAGCC
AGCAAAAAGA AAAAGTAG
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| Protein sequence | MNNEIKIRGA RTHNLKNINL DIPREKLVVL TGLSGSGKSS LAFDTLYAEG QRRYVESLSA
YARQFLQLME KPDVDTIEGL SPAISIEQKA TSHNPRSTVG TVTEIHDYLR LLFARAGTPH
CPDHDLPLEA QSVSQMVDTV LSMPEDTKLM VLAPVVSERK GEFVDLFQDL QAQGFVRFRV
RSGGGTANAA KAEIFEVDQL PTLKKNDKHS IEMVVDRIKV RPDIQQRLAE SFETALRLAD
GKAMIVDMDT GKEMIFSSKF ACPVCSYSLQ ELEPRLFSFN NPMGACPSCD GLGHQSFFDP
KRIVAHPDLS LASGAIKGWD RRNQFYFKLL QTLAKHGGFD VEKPFETLSK KQQDLILLGS
GDVTIPFEYI NERGKNSIRE HAFEGIVANF ERRYRETDSM TVREELSRYQ NVQTCPGCNG
SRLRKEARFV EVGEKKQSRA IYEISALPLK EAKEYFETLE LKGAKREIAD KIVKEISARL
RFLNDVGLDY LSLERSADTL SGGEAQRIHL ASQIGSGLTG VMYVLDEPSI GLHQRDNDRL
IGTLKHLRDL GNSVLVVEHD EDMIRASDWV IDIGPGAGVH GGEVVAQGTP TEIEANPNSL
TGAYLAGREV IAVPDKRIPV NERFLEIIGA RGNNLQSVHA KIPVGLLTCV TGVSGSGKST
LINDTLHHAV AQHLYGSNAE PAAHDAIKGL EHFDKVISVD QSPIGRTPRS NPATYTGLFT
PIRELFAGVP ASRERGYEAG RFSFNVKGGR CDSCEGDGVL KVEMHFLPDV YVPCDVCHGK
RYNRETLDIR YKGKNIHEVL SMTIEQAHEF FEAIPVVKRK LKTLLDVGLG YVKLGQSATT
LSGGEAQRVK LSLELSKRDT GRTLYILDEP TTGLHFHDIQ LLLTVIQTLK KQGNTIVIIE
HNLDVIKTAD WIIDLGPKGG AGGGQIIATG TPEDVANNEV SFTGHYLAPL LTRKSPTPAA
SKKKK
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