Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1581 |
Symbol | purH |
ID | 6183700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1381096 |
End bp | 1382676 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641672101 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | YP_001798272 |
Protein GI | 171464159 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.292698 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 0.687224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTA CAGCCCTTCT CTCCGTCTCC GATAAAAATG GCATCGTTCC TTTCGCTAAG TCCCTGCATG AGCAAGGCAT CAAACTCATT TCAACTGGCG GCACCGCAAA GCTATTAGCT GAAAATGGCC TGCCCGTTGT TGAAATTTCT TCGCTAACAA AGTTTCCGGA AATGCTCGAT GGTCGTGTAA AAACCCTGCA CCCGATGGTC CATGGCGGCT TGCTGGCTCG CAGAGATTTT CCAGAACATA TGGCTGCCTT GAAAGAGTAT GGTATTAATA CGATCGATAT GCTTGTCATC AACCTATACC CCTTCAATGA GACCGTCGCC AAGGAAAATT GTTCATTTGA AGATGCAGTG GAGAATATTG ATATTGGTGG TCCTGCGATG TTGCGTGCTG CAGCAAAAAA TCATCAAGAC GTTACTGTAT TAATTTCTCC AGAAGATTAC GCCCCTGTAT TGGCTGAAAT GAAAGCCAAT CAAAATAGTG TGTCTTACAA AACAAATTTG GCTTTAGCTA AAAAAGTGTT CGCTCATACC GCACAGTATG ATGGCGCCAT TGCCAACTAC CTATCCGCAT TGGGTGACGA CTTAGATCAC AAGGCGCGTT CCGCTTATCC AGAAACCCTG CATCTTGCCT TTGAAAAAGT ACAAGAGATG CGTTACGGCG AGAATCCACA TCAAGCTGCA GCGTTCTATA AGGACATCTA TCCTGTAGAT GGCGCTCTAG CTAATTACAA ACAGTTACAA GGAAAAGAAC TTTCTTACAA CAACATTGCT GATGCTGATT CAGCTTGGGA ATGTGTAAAA AGCTTTACTG GCAATGCCGG TGGTGCCGCA GCTTGCGTAA TCATCAAGCA TGCCAATCCT TGTGGTGTAG CTGTGGGCGC CAGCGCTCTT GAGGCATACC AAAAGGCATT TAAGACCGAC CCAAGTTCAG CCTTTGGCGG CATTATTGCT TTTAACGTTT CTTGCGATGG TGCAGCGGCA GAAGCGATCT CCAAACAGTT TGTAGAGGTA CTAATTGCTC CTAGCTTTAG CGATGAAGCC AAGACAATCT TTGCTGCCAA ACAAAATATG CGTCTTTTAG AGATTCCATT AGGCACCGCA TTTAATACGT TTGATTTCAA ACGCGTTGGT GGTGGCTTGC TCGTGCAATC GCCTGATGCT AAAAACGTAC TCGAAAATGA AATGTGTGTT GTTAGCAAAC GTCTACCAAC TCCAAGCGAA ATGCACGACA TGATGTTTGC ATGGCGCGTT GCTAAATTTG TGAAGTCTAA TGCCATCATC TATTGCGCGA ATGGCATGAC TCTCGGTATT GGTGCAGGCC AAATGAGTCG TGTTGACTCC GCACGTATGG CCAGCATTAA GGCTAAGAAT GCCGGCTTGA GCTTAAAAGG ATCTGCAGTG GCCAGTGACG CATTCTTCCC ATTTCGCGAC GGATTAGATG TGGTTGTTAA TGGCGGCGCA AGCTGTGCGA TTCAACCTGG CGGTAGCATG CGTGACGATG AAATCATTGC AGCCGCAGAT GAACACGGTA TTGCCATGAT CTTTACTGGC ACACGTCATT TCCGTCACTA A
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Protein sequence | MIRTALLSVS DKNGIVPFAK SLHEQGIKLI STGGTAKLLA ENGLPVVEIS SLTKFPEMLD GRVKTLHPMV HGGLLARRDF PEHMAALKEY GINTIDMLVI NLYPFNETVA KENCSFEDAV ENIDIGGPAM LRAAAKNHQD VTVLISPEDY APVLAEMKAN QNSVSYKTNL ALAKKVFAHT AQYDGAIANY LSALGDDLDH KARSAYPETL HLAFEKVQEM RYGENPHQAA AFYKDIYPVD GALANYKQLQ GKELSYNNIA DADSAWECVK SFTGNAGGAA ACVIIKHANP CGVAVGASAL EAYQKAFKTD PSSAFGGIIA FNVSCDGAAA EAISKQFVEV LIAPSFSDEA KTIFAAKQNM RLLEIPLGTA FNTFDFKRVG GGLLVQSPDA KNVLENEMCV VSKRLPTPSE MHDMMFAWRV AKFVKSNAII YCANGMTLGI GAGQMSRVDS ARMASIKAKN AGLSLKGSAV ASDAFFPFRD GLDVVVNGGA SCAIQPGGSM RDDEIIAAAD EHGIAMIFTG TRHFRH
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