| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1576 |
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| Symbol | |
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| ID | 6183583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1376365 |
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| End bp | 1377081 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641672096 |
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| Product | Nucleotidyl transferase |
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| Protein accession | YP_001798267 |
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| Protein GI | 171464154 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAAGA GCAGTCTAAT CCCTTGTTTT TTACTAGCCG CTGGCAGAGG TGAGCGCATG
CGCCCTCTCA CAGATATTTT ACCAAAACCA CTCTTAACAA TTCAAAATAA ATCTTTGTTA
GCGTGGCATT TGGATGCTTT AGCTAAGGCA GGAATTCAGG ATGTCGTTAT TAATCACGCG
TGGTTGGGCG AAAAAATCGA ATCAGCTCTT GGCAGCGGAG AGCAATTTAA TTTACGCATT
CAATACTCTC CTGAAGGTAG TGCCCTCGAA ACTGCTGGTG GTATTTGCAA GGCGCTACCT
ATCATCGCGC CACAAGATTA CTTTATAGTC ATCAATGGCG ATGTCTTTAG TCCAAACCTA
CCCATAGCCC AGCTATTGGA AACCGCTTCT GAAATGCGTG CGGATCACAG CAAGCCTTCA
GCGCACTTAT TGATGGTTCC TAATCCTATT CAACACCCTG AGGGTGACTT TTATCTACAA
GACTCCTGCG TTAGCAACTC TGAATTCATG GACGCTGAAA GGCTGACCTT CTCAGGAATT
GGGATTTATC ACAAAGACCT CTTTAAAAAC CTGGAATTCG GGGCTTCTGC CAAGCTTGCT
CCCTTGCTAA GGGCCGCCAT GGAGCAAAAT AAAGTGTCTG GTGAAAAATA CATCGGTCCA
TGGCACGATG TAGGTACACC TCAACGCTTA CACGAGCTCA ATGCAGCATA TGAATAA
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| Protein sequence | MSKSSLIPCF LLAAGRGERM RPLTDILPKP LLTIQNKSLL AWHLDALAKA GIQDVVINHA
WLGEKIESAL GSGEQFNLRI QYSPEGSALE TAGGICKALP IIAPQDYFIV INGDVFSPNL
PIAQLLETAS EMRADHSKPS AHLLMVPNPI QHPEGDFYLQ DSCVSNSEFM DAERLTFSGI
GIYHKDLFKN LEFGASAKLA PLLRAAMEQN KVSGEKYIGP WHDVGTPQRL HELNAAYE
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