Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1571 |
Symbol | |
ID | 6183599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | - |
Start bp | 1369574 |
End bp | 1370368 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641672092 |
Product | dimethyladenosine transferase |
Protein accession | YP_001798263 |
Protein GI | 171464150 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.836645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 76 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCGTG CACGTAAACG ATTTGGGCAA AACTTTTTAC AAGACAATGG CATTATTTAC TCTATTGTTG CGCTAATTAA TCCTAGTGCT GATATGCGCG TAATTGAGAT TGGTCCTGGC CTTGGCGCAT TAACATTGCC CTTGCTCAGT AATCTTGATC ACTTAGATCT TTTGGAGATT GATCGTGACT TAGTGGCTTT TTGGAATGAA AAAAATCTCC AGGGCTTAGC GGTCACCGAG GGCGATGCCC TTAAGTTCGA TTTCTTGGCA TGGGCGCAGA ATCGGTCGAC TAAGCAAGGC TTATGTAAGG TAGTGGGTAA TTTACCTTAC AACATCTCAT CACCATTGTT ATTTCATTTG GTTTCAGCGG CAGCATCAAT TGATGAGCAA GTCTTTATGT TGCAGGCAGA GGTTGTCGAA AGAATGGTTG CTAAGGCTGG AAGTTCAGAC TTCAGCCGCC TTTCTGTGAT GCTGCAAGCG CGCTACGATA TGGAGTTGGT ATTAGAAGTG CCACCCGAGG CCTTTGATCC ACGGCCTAAG GTGAATTCAG CCGTGGTGCG CATGATCCCT AGACGGGATT TCACATTAAG CGATGCTGAG TGGAGTGCTT TAGAGAAGGT GGTGGCTGCA GCCTTCTCCC AAAGAAGAAA AATGCTGCGT ACTAATCTGC AGGATTTTGC AGACAGGCTA GGTTTGACTG AGGTTGAACT TAAGGCGAGA GCCCAAGATA TTTCAGTGGA CCACTATATC GAGTGGGCTA AAGTTCTTGC TACTCAAGTT AATACACAGT ATTAA
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Protein sequence | MHRARKRFGQ NFLQDNGIIY SIVALINPSA DMRVIEIGPG LGALTLPLLS NLDHLDLLEI DRDLVAFWNE KNLQGLAVTE GDALKFDFLA WAQNRSTKQG LCKVVGNLPY NISSPLLFHL VSAAASIDEQ VFMLQAEVVE RMVAKAGSSD FSRLSVMLQA RYDMELVLEV PPEAFDPRPK VNSAVVRMIP RRDFTLSDAE WSALEKVVAA AFSQRRKMLR TNLQDFADRL GLTEVELKAR AQDISVDHYI EWAKVLATQV NTQY
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