| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1570 |
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| Symbol | |
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| ID | 6183438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | + |
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| Start bp | 1368825 |
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| End bp | 1369559 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641672091 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001798262 |
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| Protein GI | 171464149 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.983241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAATTGA TTCGCTCCAT CCTCTTTGCC TTATTTTTAG TGGTGTTCAC ACCCGTGTGG
TCAGCGCTAT GTATGCTGGC CTTTCCATTT CTAAGTCCAG AAAATCGATA CACTTTTATT
GGCCTATGGA ATAAGGTTGT AATTGCTTTA TTAAAACCAC TCTGTGGCAT TCATTACGAA
ATCCGTGGCA TGAAAAACAT GCAAGCCGTT ATCAATGAAC GCGTCATCAT CCTGAGCAAG
CATCAATCCG CTTATGAAAC AATTGCCTAT ATCGCCTTAC TGCCAAAACA GCTATGTTTT
GTATTTAAGA GAGAGTTACT CTGGATTCCA TTCTTTGGCT GGGCATTGGC TCTCCTAAAA
ATGATCCACA TTAATCGCTC TAACAAACAG ACTGCCGCTC ATTCTGTGGC TACTCAAGGT
AGAAAACGCT TAAGCGAAGG CAAATGGATC ATGCTTTTTC CAGAGGGCAC CAGAACGGCC
ACCGGCTCAA CCAAACCTTA CCGTAAAGGT GGCGCACGCT TAGCCAGCGC TACGGATGCC
TTGGTAATTC CAATTGCACA CAATGCTGGA CGCTGCTGGC CAAAAAATAG CTTTATCAAA
AACCCCGGTA CGGTTATTTT TTCAATAGGC CCTGCGATCA GCTCAGCCAA TAAATCAGCA
GAACAACTTC AGCAAGAGGT TGAAGGTTGG ATTGAAGCCG AAATGCGTAT AATTGACCCA
AGCGCTTATA AATAA
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| Protein sequence | MQLIRSILFA LFLVVFTPVW SALCMLAFPF LSPENRYTFI GLWNKVVIAL LKPLCGIHYE
IRGMKNMQAV INERVIILSK HQSAYETIAY IALLPKQLCF VFKRELLWIP FFGWALALLK
MIHINRSNKQ TAAHSVATQG RKRLSEGKWI MLFPEGTRTA TGSTKPYRKG GARLASATDA
LVIPIAHNAG RCWPKNSFIK NPGTVIFSIG PAISSANKSA EQLQQEVEGW IEAEMRIIDP
SAYK
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