Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_1567 |
Symbol | glyQ |
ID | 6183343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 1365192 |
End bp | 1366082 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641672088 |
Product | glycyl-tRNA synthetase subunit alpha |
Protein accession | YP_001798259 |
Protein GI | 171464146 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0752] Glycyl-tRNA synthetase, alpha subunit |
TIGRFAM ID | [TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.344409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 84 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTACTT TTCAGCAAAT CATTCTCAAA CTACAGGATT ATTGGGACCA ACAAGGTTGT GCCCTATTGC AACCCATCGA CCTCGAGGTT GGCGCCGGTA CATCTCATAC TGCGACCTTC TTGCGGGCCA TCGGTCCAGA GCCTTGGAAA GCTGCGTACG TACAGCCATC CCGTAGGCCT AAAGATGGCC GTTACGGCGA GAATCCAAAT CGCTTACAGC ACTATTATCA ATACCAAGTA GTTCTCAAGC CAGCTCCAGA AAATATTCTA GATCTGTATC TAGGTTCTCT CGCTGCTCTT GGCTTAGACC TCAAAGAAAA TGATGTCCGC TTTGTAGAGG ATGGCTGGGA AAATCCAACT CTTGGCGCTT GGGGTCTGGG CTGGGAAGTT TGGCTCAATG GCATGGAAGT AACACAGTTC ACTTATTTCC AACAAGTGGG TGGTTTAGAT TGCAAACCTG TCCTTGGCGA GATCACCTAC GGTATTGAGC GTTTGGCAAT GTATATCCAA AACTGTTCTA ACGTATATGA CTTAGTTTGG GCTGATGGTA TCTCTTACGG TGATGTGTAT CACCAAAATG AAGTTGAACA ATCTTGCTAC AACTTTGAAC ACTCCAACAC CGATTTACTC TTTGCAAATT TCACCAACTA TGAAAGCGAA GCAAAGCGCT TAATGGAAGT ACCGCTAGCA CTACCTGCTT ACGAAATGGT TCTCAAGGCG GCGTATACGT TTAACCTGTT GGATGCTCGT GGCGCTATCT CTGTTACCGA GCGCGCGGCT TATATCGGAC GCATCCGCAA TCTTTCTCGC GCCGTAGCCC AAGCCTACTT TGAGTCTAGA GAAAAACTGG GCTTCCCAAT GTGTCAACGT CCAGCTAGAG CCAAGGCTTA A
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Protein sequence | MLTFQQIILK LQDYWDQQGC ALLQPIDLEV GAGTSHTATF LRAIGPEPWK AAYVQPSRRP KDGRYGENPN RLQHYYQYQV VLKPAPENIL DLYLGSLAAL GLDLKENDVR FVEDGWENPT LGAWGLGWEV WLNGMEVTQF TYFQQVGGLD CKPVLGEITY GIERLAMYIQ NCSNVYDLVW ADGISYGDVY HQNEVEQSCY NFEHSNTDLL FANFTNYESE AKRLMEVPLA LPAYEMVLKA AYTFNLLDAR GAISVTERAA YIGRIRNLSR AVAQAYFESR EKLGFPMCQR PARAKA
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